Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 122 2e-22 seq2 105 2e-17 >seq1 Length=1541475 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || ||||| |||||||| || || ||| ||||||||| |||| || || Sbjct 446178 ACCGGCAAAACTATCACTTTAGAGGTAGAATCTTCTGACACTATCGATAATGTCAAATCG 446119 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || |||||||| || ||| |||||||| || || || || ||| Sbjct 446118 AAGATTCAAGATAAGGAAGGAATCCCTCCTGACCAGCAAAGACTCATTTTTGCTGGTAAG 446059 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | ||||| || || ||| || ||||||||||| | |||||||||||||| | ||| Sbjct 446058 CAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATTCAGAAAGAGTCTACCTTGCAC 445999 Query 206374 CTTGTTTTGAGA 206385 | || ||||| Sbjct 445998 TTGGTCCTGAGA 445987 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || ||||| || ||||| | || || || |||||||| |||| Sbjct 445275 AAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAC 445216 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || ||||| || || |||||||| || ||| |||||||| || || Sbjct 445215 GTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAGCAAAGACTCATTTTT 445156 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | ||||| || || ||| || ||||||||||| | ||||| || ||| Sbjct 445155 GCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATTCAGAAGGAATCT 445096 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 |||||||| | ||||||||||| Sbjct 445095 ACTCTTCATTTGGTTTTGAGACT 445073 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || ||||| || ||||| | || || || |||||||| |||| Sbjct 445959 AAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAT 445900 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || |||||||| || |||||||| || ||| |||||||| || || Sbjct 445899 GTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAGCAAAGACTCATTTTT 445840 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | ||||| || || ||| || ||||||||||| | || || ||||| Sbjct 445839 GCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATTCAAAAGGAGTCG 445780 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 || | ||||| ||||||||| Sbjct 445779 ACCTTGCACCTGGTTTTGAGA 445759 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || ||||| || ||||| | || || || |||||||| |||| Sbjct 445503 AAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAT 445444 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || |||||||| || |||||||| || ||| ||||||||||| ||| Sbjct 445443 GTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAGCAAAGACTTATTTTC 445384 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| | ||||| || || || || |||| || ||| | || || ||||| Sbjct 445383 GCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAACATTCAAAAGGAGTCG 445324 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 || | || || ||||||||| Sbjct 445323 ACCTTGCATCTGGTTTTGAGA 445303 Score = 87.8 bits (96), Expect = 4e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || ||||| || ||||| | || || || |||||||| |||| Sbjct 445731 AAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAT 445672 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| | ||| ||||| || ||||| || || ||| || || ||| | || || Sbjct 445671 GTGAAATCTAAA-ATTCAGGATAAAGAGGGTATCCCGCCTGATCAACAGAGATTGATTTT 445613 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || ||||| | ||||| || || ||| || | ||||||||| | ||||||||||| Sbjct 445612 CGCTGGTAAGCAACTCGAAGACGGCAGAACTCTGTCTGATTACAACATTCAGAAAGAGTC 445553 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| | ||||| || ||||| Sbjct 445552 TACCTTGCACCTGGTCCTGAGA 445531 >seq2 Length=1516309 Score = 105 bits (116), Expect = 2e-17 Identities = 158/224 (71%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| ||||| || ||| || | || ||||| || ||||| ||||| || || Sbjct 177566 AAAATG---CAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAG 177510 Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 ||| ||||| |||| || ||| ||||| ||||| ||||||||||| || Sbjct 177509 TCTTCCGACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCT 177450 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| |||||| | ||||||||||| ||||| | || || || || || | | || Sbjct 177449 GACCAGCAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGAC 177390 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 |||||| |||| |||||||| ||| | || | ||| ||||||| Sbjct 177389 TACAACATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACT 177346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820694005447