Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1 122 2e-22
seq2 105 2e-17
>seq1
Length=1541475
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || ||||| |||||||| || || ||| ||||||||| |||| || ||
Sbjct 446178 ACCGGCAAAACTATCACTTTAGAGGTAGAATCTTCTGACACTATCGATAATGTCAAATCG 446119
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || |||||||| || ||| |||||||| || || || || |||
Sbjct 446118 AAGATTCAAGATAAGGAAGGAATCCCTCCTGACCAGCAAAGACTCATTTTTGCTGGTAAG 446059
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | ||||| || || ||| || ||||||||||| | |||||||||||||| | |||
Sbjct 446058 CAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATTCAGAAAGAGTCTACCTTGCAC 445999
Query 206374 CTTGTTTTGAGA 206385
| || |||||
Sbjct 445998 TTGGTCCTGAGA 445987
Score = 114 bits (126), Expect = 3e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || ||||| || ||||| | || || || |||||||| ||||
Sbjct 445275 AAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAC 445216
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || ||||| || || |||||||| || ||| |||||||| || ||
Sbjct 445215 GTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAGCAAAGACTCATTTTT 445156
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| | ||||| || || ||| || ||||||||||| | ||||| || |||
Sbjct 445155 GCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATTCAGAAGGAATCT 445096
Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387
|||||||| | |||||||||||
Sbjct 445095 ACTCTTCATTTGGTTTTGAGACT 445073
Score = 105 bits (116), Expect = 2e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || ||||| || ||||| | || || || |||||||| ||||
Sbjct 445959 AAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAT 445900
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || |||||||| || |||||||| || ||| |||||||| || ||
Sbjct 445899 GTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAGCAAAGACTCATTTTT 445840
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| | ||||| || || ||| || ||||||||||| | || || |||||
Sbjct 445839 GCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATTCAAAAGGAGTCG 445780
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
|| | ||||| |||||||||
Sbjct 445779 ACCTTGCACCTGGTTTTGAGA 445759
Score = 93.3 bits (102), Expect = 1e-13
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || ||||| || ||||| | || || || |||||||| ||||
Sbjct 445503 AAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAT 445444
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || |||||||| || |||||||| || ||| ||||||||||| |||
Sbjct 445443 GTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAGCAAAGACTTATTTTC 445384
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| | ||||| || || || || |||| || ||| | || || |||||
Sbjct 445383 GCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAACATTCAAAAGGAGTCG 445324
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
|| | || || |||||||||
Sbjct 445323 ACCTTGCATCTGGTTTTGAGA 445303
Score = 87.8 bits (96), Expect = 4e-12
Identities = 142/202 (70%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || ||||| || ||||| | || || || |||||||| ||||
Sbjct 445731 AAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAT 445672
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| | ||| ||||| || ||||| || || ||| || || ||| | || ||
Sbjct 445671 GTGAAATCTAAA-ATTCAGGATAAAGAGGGTATCCCGCCTGATCAACAGAGATTGATTTT 445613
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || ||||| | ||||| || || ||| || | ||||||||| | |||||||||||
Sbjct 445612 CGCTGGTAAGCAACTCGAAGACGGCAGAACTCTGTCTGATTACAACATTCAGAAAGAGTC 445553
Query 206364 TACTCTTCACCTTGTTTTGAGA 206385
||| | ||||| || |||||
Sbjct 445552 TACCTTGCACCTGGTCCTGAGA 445531
>seq2
Length=1516309
Score = 105 bits (116), Expect = 2e-17
Identities = 158/224 (71%), Gaps = 3/224 (1%)
Strand=Plus/Minus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| ||||| || ||| || | || ||||| || ||||| ||||| || ||
Sbjct 177566 AAAATG---CAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAG 177510
Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283
||| ||||| |||| || ||| ||||| ||||| ||||||||||| ||
Sbjct 177509 TCTTCCGACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCT 177450
Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343
||| |||||| | ||||||||||| ||||| | || || || || || | | ||
Sbjct 177449 GACCAGCAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGAC 177390
Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
|||||| |||| |||||||| ||| | || | ||| |||||||
Sbjct 177389 TACAACATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACT 177346
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820694005447
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |