Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq4 194 2e-43
seq2 154 2e-31
seq6 89.7 7e-12
>seq4
Length=1302532
Score = 194 bits (214), Expect = 2e-43
Identities = 375/540 (69%), Gaps = 20/540 (4%)
Strand=Plus/Minus
Query 1455746 TTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGC 1455805
|||||| ||||||| ||| ||||| ||| ||| | |||||| || ||||| |||||
Sbjct 920659 TTTGTCTTGTTCCCTATCAAGTACCACGAGATTTGGCAGATGTAC-AAGAAGGCAGAGGC 920601
Query 1455806 CTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCG-- 1455863
||| || |||||||| ||||| |||| || | ||| | | |||||
Sbjct 920600 CTCGTTCTGGACCGCAGAGGAAATCGATCTGTCCAAGGACCTGCACGACTGGAACAACAG 920541
Query 1455864 -CTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCG 1455922
|| | |||| ||||| | | || | | || | ||||| ||| || || |
Sbjct 920540 ACTCAACGACAACGAGAGATACTTTGTTTCGAGAGTGTTGGCCTTCTTT-GCTGCTTCGG 920482
Query 1455923 ATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTT-TATGAAAGAGGTCCAATTGCCAGAG 1455981
| ||||| || ||||||| ||| || ||| | || ||||| ||| | || |||
Sbjct 920481 ACGGCATTGTCAACGAGAACTTGGTCGAGAACTTCTCTGCC-GAGGTGCAAGTTCCTGAG 920423
Query 1455982 GCACGTTTGTTT-TACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTC 1456040
|| | ||||| ||||||||||||||| || || ||||||||||| ||||| |||||
Sbjct 920422 GC-CAAGTGTTTCTACGGGTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTC 920364
Query 1456041 GCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAG--GACCACCTCTTTCGCGCC 1456098
||| |||||||||||||||||||||||||| | |||| || ||| || ||||
Sbjct 920363 GCTTCTGATCGACACCTACGTCAAGGACCC--TAAGGAAGCTGAGTTCCTTTTCAACGCC 920306
Query 1456099 ATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAG 1456158
|| || || | || | | | | | |||||||| ||||| |||| ||||||||| |
Sbjct 920305 ATTGAGACCATCCCATGTATCAAGGAGAAGGCCGAATGGGCCATGAGATGGATCAACGAC 920246
Query 1456159 GAGG--GCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTT 1456215
|||| ||| | ||||||||| | ||||| | ||||| | ||| ||||| || ||
Sbjct 920245 GAGGAAGCC----CTGTTTGCCGAGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTT 920190
Query 1456216 TTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||| ||| || | | ||||| |||||||||||| | || || ||||| |||||
Sbjct 920189 CTTCTCTGGCTCGTTTGCCTCGATCTTCTGGCTCAAGAAGAGAGGACTGATGCCTGGTCT 920130
Score = 129 bits (142), Expect = 8e-24
Identities = 231/328 (70%), Gaps = 12/328 (4%)
Strand=Plus/Minus
Query 1456460 GACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGAC---GTGCCC 1456516
||||||||||||||||||| | || ||| ||||| || | |||| |||| |
Sbjct 920083 GACTTTGCCTGTCTGCTCTTCTCGCACCTCAACAACACCCCAAACAGCGACATCGTGCTC 920024
Query 1456517 AAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGT-CAGCGAGTCGCTGCC 1456575
||| |||||| |||||||||||||||||| |||||| | | || ||| | |||||
Sbjct 920023 AAG---ATCATCACCGAGGCCGTCGAGATCGA-AAAGAGATACTTCACCGACGCCCTGCC 919968
Query 1456576 GGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCC 1456635
|| || | || |||||| || | || |||||||||||| | || ||| || ||
Sbjct 919967 TGTCAACCTGCTGGGTATGAACTGCAAC-CTGATGTGCCAGTACGTGGAGTTT-GTTGCT 919910
Query 1456636 GACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695
||||| ||||| | || |||||| ||||||||||| | | |||||||||
Sbjct 919909 GACCGGCTGCTTTTATCTCTGGGCTGCA-AGAAGCACTACAACGCCACAAACCCGTTCGA 919851
Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGA 1456754
| |||||| ||||| || | |||||||||||||| |||||| | || |||
Sbjct 919850 CTTCATGGAGAACATCTCTCTTGCAGGCAAGACCAACTTCTTCGAGAAGAGAGTCTCCGA 919791
Query 1456755 GTACGCCAAGGCCGGCGTCACCGCCAAG 1456782
||| ||||| ||||||| ||||||
Sbjct 919790 TTACCAGAAGGCGGGCGTCATGGCCAAG 919763
>seq2
Length=1516309
Score = 154 bits (170), Expect = 2e-31
Identities = 207/288 (72%), Gaps = 0/288 (0%)
Strand=Plus/Minus
Query 259895 ATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGC 259954
|||||||| | || |||||| ||| |||| || || ||||||||||| || || |
Sbjct 917779 ATGTCGCAAAAATTCTTCACCCACGCGTCGCCAACTCTGTTTAATGCCGGTACTCCTCAT 917720
Query 259955 CCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTAT 260014
||||||| || || || || || | | |||||||| ||| || ||||| |||||||||
Sbjct 917719 CCGCAGATGTCTTCCTGTTTCTTGGTTGCCATGAAGGACGACTCCATCGACGGCATCTAT 917660
Query 260015 GACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA 260074
||||| |||||| || || || ||||||||||| || || ||||| ||| | |
Sbjct 917659 GACACCCTCAAGACCTGTGCTCTGATCTCCAAGGCTGCTGGAGGCATTGGTCTGCACATT 917600
Query 260075 CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTT 260134
||||| | | || | || | ||| | || || ||||||||| |||||||||| |
Sbjct 917599 CACAACATTAGATCCACCGGGTCTTACATCGCTGGAACCAACGGCACGTCCAACGGCATC 917540
Query 260135 GTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
| || ||| | | || || ||| |||| || | ||||||||||||
Sbjct 917539 ATTCCAATGGTGAGAGTGTTCAACAACACCGCCAGATACGTCGACCAG 917492
>seq6
Length=996047
Score = 89.7 bits (98), Expect = 7e-12
Identities = 174/252 (69%), Gaps = 4/252 (2%)
Strand=Plus/Plus
Query 1816023 CGCGCTCAATGTAGGTGGCGTCGGCGCCGTCGCCGCCATATGCAAACTGGACAATGTCGC 1816082
||| ||| |||| | | |||| |||||||| ||||| ||||| || ||| ||
Sbjct 771602 CGCCCTCCATGTCGAGCGGGTCGAGCCCGTCGCCTCCATAGTTGAACTGCACGATGCCGT 771661
Query 1816083 CGTTGGCGTTGCGCACGAGGCCGCCGC-GCTTGATCTGCAGGCTCTCCATCGACTTGATG 1816141
| | | |||||||||| || || || | || |||| |||||||||||| ||
Sbjct 771662 TGCTCGAGTTGCGCACGGTCTCGTCGTAGCCGGCACT-CAGGTCCTCCATCGACTTCATC 771720
Query 1816142 CACCGGCGCTGGATGTAGCCACGTC-CGGCGGTCTTGACGGCCGTGTCGACCAGGCCCTC 1816200
||| ||| | ||||||| |||| | ||||||||||| ||||| || || || |||||
Sbjct 771721 AGCCGCCGCGAGGTGTAGCC-CGTCTCTGCGGTCTTGACAGCCGTATCCACTAGCCCCTC 771779
Query 1816201 GCGGCCGCCGATCATGTGCAAAAACATCTCGCGCGAGTTGAGGCCGCGCTCGTACGAGTT 1816260
| |||| ||| ||| || | | |||| ||| |||| ||| | | |||||
Sbjct 771780 TCTGCCGGAGATGGCGTGGAACAGGAACTCGGGCGGACTGAGCCCGGAAAAGAAAGAGTT 771839
Query 1816261 GCGCACAAAGCC 1816272
||||||||| ||
Sbjct 771840 GCGCACAAACCC 771851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177810524837134
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |