Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq4 194 2e-43 seq2 154 2e-31 seq6 89.7 7e-12 >seq4 Length=1302532 Score = 194 bits (214), Expect = 2e-43 Identities = 375/540 (69%), Gaps = 20/540 (4%) Strand=Plus/Minus Query 1455746 TTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGC 1455805 |||||| ||||||| ||| ||||| ||| ||| | |||||| || ||||| ||||| Sbjct 920659 TTTGTCTTGTTCCCTATCAAGTACCACGAGATTTGGCAGATGTAC-AAGAAGGCAGAGGC 920601 Query 1455806 CTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCG-- 1455863 ||| || |||||||| ||||| |||| || | ||| | | ||||| Sbjct 920600 CTCGTTCTGGACCGCAGAGGAAATCGATCTGTCCAAGGACCTGCACGACTGGAACAACAG 920541 Query 1455864 -CTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCG 1455922 || | |||| ||||| | | || | | || | ||||| ||| || || | Sbjct 920540 ACTCAACGACAACGAGAGATACTTTGTTTCGAGAGTGTTGGCCTTCTTT-GCTGCTTCGG 920482 Query 1455923 ATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTT-TATGAAAGAGGTCCAATTGCCAGAG 1455981 | ||||| || ||||||| ||| || ||| | || ||||| ||| | || ||| Sbjct 920481 ACGGCATTGTCAACGAGAACTTGGTCGAGAACTTCTCTGCC-GAGGTGCAAGTTCCTGAG 920423 Query 1455982 GCACGTTTGTTT-TACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTC 1456040 || | ||||| ||||||||||||||| || || ||||||||||| ||||| ||||| Sbjct 920422 GC-CAAGTGTTTCTACGGGTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTC 920364 Query 1456041 GCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAG--GACCACCTCTTTCGCGCC 1456098 ||| |||||||||||||||||||||||||| | |||| || ||| || |||| Sbjct 920363 GCTTCTGATCGACACCTACGTCAAGGACCC--TAAGGAAGCTGAGTTCCTTTTCAACGCC 920306 Query 1456099 ATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAG 1456158 || || || | || | | | | | |||||||| ||||| |||| ||||||||| | Sbjct 920305 ATTGAGACCATCCCATGTATCAAGGAGAAGGCCGAATGGGCCATGAGATGGATCAACGAC 920246 Query 1456159 GAGG--GCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTT 1456215 |||| ||| | ||||||||| | ||||| | ||||| | ||| ||||| || || Sbjct 920245 GAGGAAGCC----CTGTTTGCCGAGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTT 920190 Query 1456216 TTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||| ||| || | | ||||| |||||||||||| | || || ||||| ||||| Sbjct 920189 CTTCTCTGGCTCGTTTGCCTCGATCTTCTGGCTCAAGAAGAGAGGACTGATGCCTGGTCT 920130 Score = 129 bits (142), Expect = 8e-24 Identities = 231/328 (70%), Gaps = 12/328 (4%) Strand=Plus/Minus Query 1456460 GACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGAC---GTGCCC 1456516 ||||||||||||||||||| | || ||| ||||| || | |||| |||| | Sbjct 920083 GACTTTGCCTGTCTGCTCTTCTCGCACCTCAACAACACCCCAAACAGCGACATCGTGCTC 920024 Query 1456517 AAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGT-CAGCGAGTCGCTGCC 1456575 ||| |||||| |||||||||||||||||| |||||| | | || ||| | ||||| Sbjct 920023 AAG---ATCATCACCGAGGCCGTCGAGATCGA-AAAGAGATACTTCACCGACGCCCTGCC 919968 Query 1456576 GGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCC 1456635 || || | || |||||| || | || |||||||||||| | || ||| || || Sbjct 919967 TGTCAACCTGCTGGGTATGAACTGCAAC-CTGATGTGCCAGTACGTGGAGTTT-GTTGCT 919910 Query 1456636 GACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695 ||||| ||||| | || |||||| ||||||||||| | | ||||||||| Sbjct 919909 GACCGGCTGCTTTTATCTCTGGGCTGCA-AGAAGCACTACAACGCCACAAACCCGTTCGA 919851 Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGA 1456754 | |||||| ||||| || | |||||||||||||| |||||| | || ||| Sbjct 919850 CTTCATGGAGAACATCTCTCTTGCAGGCAAGACCAACTTCTTCGAGAAGAGAGTCTCCGA 919791 Query 1456755 GTACGCCAAGGCCGGCGTCACCGCCAAG 1456782 ||| ||||| ||||||| |||||| Sbjct 919790 TTACCAGAAGGCGGGCGTCATGGCCAAG 919763 >seq2 Length=1516309 Score = 154 bits (170), Expect = 2e-31 Identities = 207/288 (72%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 259895 ATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGC 259954 |||||||| | || |||||| ||| |||| || || ||||||||||| || || | Sbjct 917779 ATGTCGCAAAAATTCTTCACCCACGCGTCGCCAACTCTGTTTAATGCCGGTACTCCTCAT 917720 Query 259955 CCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTAT 260014 ||||||| || || || || || | | |||||||| ||| || ||||| ||||||||| Sbjct 917719 CCGCAGATGTCTTCCTGTTTCTTGGTTGCCATGAAGGACGACTCCATCGACGGCATCTAT 917660 Query 260015 GACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA 260074 ||||| |||||| || || || ||||||||||| || || ||||| ||| | | Sbjct 917659 GACACCCTCAAGACCTGTGCTCTGATCTCCAAGGCTGCTGGAGGCATTGGTCTGCACATT 917600 Query 260075 CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTT 260134 ||||| | | || | || | ||| | || || ||||||||| |||||||||| | Sbjct 917599 CACAACATTAGATCCACCGGGTCTTACATCGCTGGAACCAACGGCACGTCCAACGGCATC 917540 Query 260135 GTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 | || ||| | | || || ||| |||| || | |||||||||||| Sbjct 917539 ATTCCAATGGTGAGAGTGTTCAACAACACCGCCAGATACGTCGACCAG 917492 >seq6 Length=996047 Score = 89.7 bits (98), Expect = 7e-12 Identities = 174/252 (69%), Gaps = 4/252 (2%) Strand=Plus/Plus Query 1816023 CGCGCTCAATGTAGGTGGCGTCGGCGCCGTCGCCGCCATATGCAAACTGGACAATGTCGC 1816082 ||| ||| |||| | | |||| |||||||| ||||| ||||| || ||| || Sbjct 771602 CGCCCTCCATGTCGAGCGGGTCGAGCCCGTCGCCTCCATAGTTGAACTGCACGATGCCGT 771661 Query 1816083 CGTTGGCGTTGCGCACGAGGCCGCCGC-GCTTGATCTGCAGGCTCTCCATCGACTTGATG 1816141 | | | |||||||||| || || || | || |||| |||||||||||| || Sbjct 771662 TGCTCGAGTTGCGCACGGTCTCGTCGTAGCCGGCACT-CAGGTCCTCCATCGACTTCATC 771720 Query 1816142 CACCGGCGCTGGATGTAGCCACGTC-CGGCGGTCTTGACGGCCGTGTCGACCAGGCCCTC 1816200 ||| ||| | ||||||| |||| | ||||||||||| ||||| || || || ||||| Sbjct 771721 AGCCGCCGCGAGGTGTAGCC-CGTCTCTGCGGTCTTGACAGCCGTATCCACTAGCCCCTC 771779 Query 1816201 GCGGCCGCCGATCATGTGCAAAAACATCTCGCGCGAGTTGAGGCCGCGCTCGTACGAGTT 1816260 | |||| ||| ||| || | | |||| ||| |||| ||| | | ||||| Sbjct 771780 TCTGCCGGAGATGGCGTGGAACAGGAACTCGGGCGGACTGAGCCCGGAAAAGAAAGAGTT 771839 Query 1816261 GCGCACAAAGCC 1816272 ||||||||| || Sbjct 771840 GCGCACAAACCC 771851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177810524837134