Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq2 201 2e-46
seq4 187 3e-42
seq3 159 5e-34
>seq2
Length=1516309
Score = 201 bits (222), Expect = 2e-46
Identities = 542/822 (66%), Gaps = 14/822 (2%)
Strand=Plus/Plus
Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654
|||| | ||| || || || |||||||| || || || || ||||||| ||| |
Sbjct 917331 ACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAGGTCTCTGGCTCTGATC 917390
Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714
|| || || || || || | |||| ||| || | |||||| || ||||||||
Sbjct 917391 TCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAAAATATCCGAGTGCCATGGC 917450
Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774
|| | || | || | | || || || || || |||||||| || | |||||||||
Sbjct 917451 TCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCCCTGGTCGACGTATCTGGCG 917510
Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834
||||| || | ||||||| ||| ||||| || || || || | || || |||||||
Sbjct 917511 GTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGTGCCGTTGGTTCCAGCG 917570
Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894
|| ||| || | | | ||| || ||| ||||| || ||||| || ||
Sbjct 917571 ATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGACCAATGCCTCCAGCAGCCTTG 917630
Query 69895 GAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATG 69954
||||| |||||||| || | |||||||| || || || ||| || || |||||
Sbjct 917631 GAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGTCGATGGAGTCGTCCTTCATG 917690
Query 69955 TTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGA 70014
|| | |||||| |||||| || |||| ||| || |||||||| | || ||
Sbjct 917691 GCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTACCGGCATTAAACAGAGTTGGC 917750
Query 70015 GATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATA--GCTGATTCTA 70072
|| ||||| ||||| |||||| || | ||| ||||| || || || |||| |
Sbjct 917751 GACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGTCTCGATGACGCTGGGAATG 917810
Query 70073 T-ATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACC 70131
| ||| | ||| || || || || |||||||| | ||| ||||| |||| || |
Sbjct 917811 TCATCGCC---ATGGATACCAATGGCCACACGCATGACCATGTGCTGGGGTCTCTCGGCG 917867
Query 70132 GTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTG 70191
||| || || ||||| || ||||| ||||| || || || ||||||||||||
Sbjct 917868 ACTTTTCCATCAATCTTCAAGAGATATGACCGCTCCAGCGTCTTGAAGCCAAAATAGTTG 917927
Query 70192 TATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC--CTTATATTTGGTAA 70249
|| ||||||||||| ||||| | || |||| || || | || | | ||| |
Sbjct 917928 TACGAAAAGTCTCTATCGTACACTATGGCAGAGTTCAGCTCGTCGGCGTGCTCCTGG--A 917985
Query 70250 CTATATCCATAACAGTAGGT--GAGATAATCGGAGATCGTTTACCATTTTTAGGATTAAC 70307
| |||| || | || ||||| || || || | || ||||| || || || |
Sbjct 917986 C--AATCCGGTACGTTTCGTCCGAGATCATTGGCGAAGGCTTGCCATTCTTGGGGTTGAT 918043
Query 70308 ATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATT 70367
||||| | | | | || | || | ||| | || | |||| |||||| | ||
Sbjct 918044 ATAGTGGTACAGCTGGTCAACGACCTGGGAAAACTGCTTGGTGGTTTGCTTGTGCAGGTT 918103
Query 70368 TGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409
|| |||||||||||||| || || | || ||||| |||||
Sbjct 918104 GGAAATGGCTATTCTGGCGGCCAGGGTGGCGTAGTCGGGATG 918145
>seq4
Length=1302532
Score = 187 bits (206), Expect = 3e-42
Identities = 598/918 (65%), Gaps = 15/918 (2%)
Strand=Plus/Plus
Query 39304 TTCTTGTGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGT 39363
|||||| | ||| || ||| || ||||| || || | |||||||| || || ||
Sbjct 919761 TTCTTG-GCCATGACGCCCGCCTTCTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGT 919819
Query 39364 TTTGCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttt 39423
|||||| | | || || || |||||||| || ||||| || || || || || | ||
Sbjct 919820 CTTGCCTGCAAGAGAGATGTTCTCCATGAAGTCGAACGGGTTTGTGGCGTTGTAGTGCTT 919879
Query 39424 tttAAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCAT 39483
|| | || | | ||| || | || |||||||| || | ||| |||||
Sbjct 919880 CTTGCAGCCCAGAGATAAAAGCAGCCGGTCAGCAACAAACTCCACGTACTGGCACATCAG 919939
Query 39484 TTCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTA-GAAACTCTTTTTCGA 39542
| || ||||| || | || || || || || || || || | | | ||||||| |||
Sbjct 919940 GTTGCAGTTCATACCCAGCAGGTTGACAGGCAGGGCGTCGGTGAAGTATCTCTTTT-CGA 919998
Query 39543 TGTCTACGGCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGA-TGCAATAAA 39601
| || |||||||| || || ||| | | || || || ||| || | |
Sbjct 919999 TCTCGACGGCCTCGGTGATGATCT---TGAGCACGATGTCGCTGTTTGGGGTGTTGTTGA 920055
Query 39602 TGTTTAA--ACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATT 39659
|| | | | | ||||| ||||| ||| || ||||| ||||| | || || |
Sbjct 920056 GGTGCGAGAAGAGCAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACT 920115
Query 39660 CGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAA 39719
|||| || || || || |||||||| || || | ||| |||||||| || || | ||||
Sbjct 920116 CGTTCGAGAAGGTCAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAA 920175
Query 39720 AAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAAC 39779
| || ||||| ||||| || || || || || ||||| ||||| |||||||| | |
Sbjct 920176 ACGAGCCAGAGAAGAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAACA 920235
Query 39780 TTGTATCATTAT-GT--ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCA 39836
| || | | || ||||| || ||||| || || |||| ||| | ||| || |
Sbjct 920236 GGGCTTCCTCGTCGTTGATCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGA 920295
Query 39837 TTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTA 39896
| || || || || || || || | | ||| | | || || || || || || |
Sbjct 920296 TGGTCTCAATGGCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGA 920355
Query 39897 TTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAAC 39956
| | || ||| |||| || |||||||| || ||| ||||| || ||||| ||||
Sbjct 920356 TCAGAAGCGAGTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAAC 920415
Query 39957 ATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTA 40016
| | || |||| || ||| ||||| | | | || | || |||| || || || || |
Sbjct 920416 ACTTGGCCTCAGGAACTTGCACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAA 920475
Query 40017 TTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTG 40076
| || || ||| ||||| || ||||| || || ||| ||| | || | |
Sbjct 920476 TGCCGTCCGAAGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGTTGTCGT 920535
Query 40077 TCAAT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAA 40133
| | | || |||||||| | | || || || | ||| | ||| || || ||||| |
Sbjct 920536 TGAGTCTGTTGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGA 920595
Query 40134 ACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAA 40193
|||| ||||||||||| |||||||| | ||| || || | || | || || || | |
Sbjct 920596 ACGAGGCCTCTGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGA 920655
Query 40194 CAAATCTATTTGGATTTT 40211
|||| || || |||||
Sbjct 920656 CAAACCTTCTTTTATTTT 920673
>seq3
Length=1363476
Score = 159 bits (176), Expect = 5e-34
Identities = 393/583 (67%), Gaps = 20/583 (3%)
Strand=Plus/Minus
Query 69268 AGTGCTACAGATGCTAGATTACAAACTGCTA---CCTCATTAGAATTTGCATATTGTATT 69324
||||| | ||| ||||||| || |||||| |||||||||| || ||||| |
Sbjct 659397 AGTGCCAAAGAGCCTAGATTGCAGACTGCTGTTTCCTCATTAGA---TGAATATTCAACG 659341
Query 69325 ATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTG 69384
|| || ||| ||||| | ||||| || |||| ||||||||| ||| ||||||
Sbjct 659340 ATTTCACAACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTA 659281
Query 69385 TTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATA 69444
|| |||||||| ||||| || | || || || || ||||| ||||||| | | ||
Sbjct 659280 TTGCAGGCGTCTTTGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATC 659221
Query 69445 GATTTCCAAACGACCCTAGCATTTA--TTACGGTCTTGTAACGCTTCTCTTTTTCATAT- 69501
| | ||| | | || || | |||||| | || || ||| ||||||
Sbjct 659220 GCATGCCACAGTTTCTGGGCTTTCACTTTACGGA--TATAGCGACCCTCACGTTCATACC 659163
Query 69502 TGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCAT-- 69559
||| | || ||| | ||||||||||| || ||| | ||||||| ||| ||
Sbjct 659162 TGT-TGTAAAGCTTGACAAATTCATCTCCATAAGTGTCACTGAGTCCAGGAGATTGATCC 659104
Query 69560 TTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAA 69619
| ||| | | | ||||| | | ||| | || ||| | |||||| | ||| || |
Sbjct 659103 TCGGAAAAA--AGGCACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTA 659046
Query 69620 TCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCC-TGTAttttttttA 69678
|||||||||| ||| | |||||| | | | ||||||| ||||| || |||| | |
Sbjct 659045 TCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCA 658986
Query 69679 AGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGA-CTCC 69737
|| || || ||||| | | || | |||||| || |||| ||| || || | | | ||
Sbjct 658985 AG-TCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACAT-GCAAAAAGCGCC 658928
Query 69738 CGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCAT 69797
|||| ||||||||| || ||||| | ||| | || ||| | ||| ||||| | |||
Sbjct 658927 TGGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCAT 658868
Query 69798 CGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840
|| | || || || ||| ||||||| ||||||||||| |||
Sbjct 658867 AGGCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTAA 658825
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908739895480
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