Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 316 3e-81 seq4 96.9 4e-15 seq1 91.5 2e-13 >seq2 Length=1516309 Score = 316 bits (350), Expect = 3e-81 Identities = 1137/1755 (65%), Gaps = 41/1755 (2%) Strand=Plus/Plus Query 110354 GCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGC 110413 |||| | || ||| |||||||| |||||||||||||||| ||||| | || | ||| Sbjct 916119 GCCTGGGTTCTGAGGTAGTACATGCCGGTCTTGAGTCCTTTCTTCCAGCCATAGAAGTGC 916178 Query 110414 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTT 110471 || || | | |||| ||| ||||| | | | | || ||||| ||| |||| Sbjct 916179 ATCGACGTCAACTTGCCCATGGTTGGGTTCTTGAGGTGGATATTCATCGACTGCGACT-- 916236 Query 110472 GGTCAATGAA-GCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCC 110530 |||| ||| | ||||| | || | |||||||| || || | ||| | ||| ||| Sbjct 916237 GGTCGATGTACGCGCCTCTGTCG-GCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCC 916295 Query 110531 CAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAA 110590 || || ||||| || || | ||| | || | ||| | || || | |||||||| || Sbjct 916296 CAGACGGTGCGGTACAGGTCCTTCAACTCCTGTGGCACATTTGGCAAGTTCTGGATCGAG 916355 Query 110591 CCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGG 110650 || |||| | |||| || |||||| | | ||| | |||| || ||| Sbjct 916356 CCGTTGTCCTTGATGATGAAATTCTTCATCGAGTCGTTCCACAATCCAAGGTTAACAAGG 916415 Query 110651 TCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAG 110710 || | | | || | |||||| || |||||||| || || |||||| |||| Sbjct 916416 TCCCTCAGCAAGTACGGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAG 916475 Query 110711 ATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCT 110770 ||||| | ||||| || || || || || |||| ||||| || || | || || || Sbjct 916476 ATGTTGGAGGTGTAAGGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCG 916535 Query 110771 GTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTG 110830 |||||||| || |||| ||| || || | || || | || || ||| || ||||| Sbjct 916536 GTTGGCATAGGAGCCACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTG 916595 Query 110831 AGAACATCCCAGTCGTAGTTGAGCTTGGTTT-CACCTT--CCCACATGTCAAACTGAAGC 110887 || |||||||| | || | |||| | ||| |||| | ||| ||||| | Sbjct 916596 AGCGAGTCCCAGTCCCAC---AGATCGGTTGGCTTCTTGCCCCAAAGGTCGAACTGCAAA 916652 Query 110888 ACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAAT 110947 | || || ||||| || || ||||||||||| || || || | | |||| Sbjct 916653 ATACCCTGCGACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATCCCTAACGGCCAGC 916712 Query 110948 TCA-CAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 111006 || ||| ||||||| | |||| || ||||| || || || | |||| ||| Sbjct 916713 TCGGCAGAG-GCCTCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTC 916771 Query 111007 CTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTT 111065 |||| || ||| ||||| | | || || | || || || || || || || | Sbjct 916772 TCTGGCCTCTGGTGAGTCAAAAG-GCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCT 916830 Query 111066 GAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGA 111124 | ||||||| |||| || |||| ||||| || || ||| || ||| ||| ||| Sbjct 916831 GGACACCCACGGCAATCGGCCTGTTGCGCATGTTGGATGTTCTTGCC-TCTGGAACAGGA 916889 Query 111125 TAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGA 111184 ||| | |||||||| |||| ||| || || || || |||| ||| ||||| | || Sbjct 916890 TAATAGTTTCTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGC 916949 Query 111185 AGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG------ACATACTTTGGAAGGGCG 111238 || ||||| | | | || || | || | | || | |||||||||| Sbjct 916950 AGCTTTTCGAAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCG 917009 Query 111239 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 111298 || || |||||||| || || ||| ||| || | || |||||| | |||||| Sbjct 917010 ATCGACGCCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAG 917069 Query 111299 CATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCA 111358 || || || || ||| || | || | ||||| ||||| |||| |||||| || Sbjct 917070 CACAAATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCG 917129 Query 111359 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA- 111417 |||||||| |||||| | ||||| || || |||||||| | | | ||| || | ||| Sbjct 917130 TCCTTGTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCAC 917189 Query 111418 AACATCGGCGGCTGGTAC-AATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGA 111476 | | || | | || | | |||||| | || || ||| ||||| | ||||||| Sbjct 917190 AGCTTCTGTGCCTTGACCGTCTGGCGT--CCACGGCCTTCCTTTTCGTATCTGGTGTAGA 917247 Query 111477 GGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAA 111536 | | | ||||| || || | ||||||| || ||||| |||| | || |||| | Sbjct 917248 GCTCCTTGAACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACA 917307 Query 111537 GAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATG 111596 | | ||| | | | | ||| || | || |||||| ||||||||||||||||| | | Sbjct 917308 GCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAG 917367 Query 111597 AAAAGAGATCTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAAC 111655 || || ||||| | | || ||| || | ||| ||||| || | || | || Sbjct 917368 GGAACAGGTCTCTGGCTCTGA-TCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAG 917426 Query 111656 TCCATGATATCCGCGTGCCATGGCTCA------AGATAGACTGCGATAGATCCCTT-TCG 111708 || | ||||||| ||||||||||||| ||| | ||| || | ||| | | Sbjct 917427 TCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTG 917486 Query 111709 ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 111768 | ||| || | || || | || ||| ||| || || | | ||||||||| || Sbjct 917487 CCTCCC----TGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGAT 917542 Query 111769 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 111828 || | || || || || || || ||| ||| ||| | | || || Sbjct 917543 GCCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAAT 917602 Query 111829 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 111888 ||||| ||||| || ||||| ||| ||||| | ||||| | | || || |||| Sbjct 917603 GTGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATA 917662 Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948 ||| |||| ||| ||||| ||||| |||| | | ||| || ||||||||||| Sbjct 917663 GATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATG 917722 Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTT 112008 || ||||| ||||| || || ||||| | ||||| |||| | ||| |||||| Sbjct 917723 AGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAG 917782 Query 112009 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068 || ||| ||||| | ||| |||||| || || ||||| || || || || ||||| Sbjct 917783 GTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCAT 917842 Query 112069 GAACATGTACTGTGG 112083 || ||||| ||| || Sbjct 917843 GACCATGTGCTGGGG 917857 >seq4 Length=1302532 Score = 96.9 bits (106), Expect = 4e-15 Identities = 328/502 (65%), Gaps = 8/502 (2%) Strand=Plus/Plus Query 122379 GACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAA 122438 ||| | |||||| |||||||||||||| || |||| ||||| ||||| ||||| || Sbjct 919796 GACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGCAAGAGAGATGTTCTCCATGAAGTCGAA 919855 Query 122439 TGGATTCTTCGCGTTCCAAATGGGTG--GCACCCCAACTTGTTTGAGGAGACGATCCGAC 122496 || || | ||||| | || | ||| |||| | || || || || | Sbjct 919856 CGGGTTTGTGGCGTTGTAG-TGCTTCTTGCAGCCCAGAGA-TAAAAGCAGCCGGTCAGCA 919913 Query 122497 ACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTT-ACATGGGAG 122555 ||| |||| | ||||| | ||||| | |||||||||| | ||||| ||| || || Sbjct 919914 ACAAACTCCACGTACTGGCACATCAGGTTGCAGTTCATACCCAGCAGGTTGACA-GGCAG 919972 Query 122556 TGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGATAGT 122615 ||||| || | | | || || ||||| || ||||| | | ||| | | | | Sbjct 919973 GGCGTCGGTGAAGTATCTCTTTTCGATCTCGACGGCCTCGGTGATGATCTTGAGCACGAT 920032 Query 122616 TTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCTGGTGGAG 122675 ||| | | || | || | | ||||||| |||||| || || || Sbjct 920033 GTCGCTGTTTGGGGTGTTGTTGAGGTGCGAGAAGAGCAGACAGGCAAAGTCGGTATGCAG 920092 Query 122676 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTT 122735 |||||| |||| | | || | || || |||||| ||||| ||||| || || | ||| Sbjct 920093 ACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACCAGGCATCAGTCCTCTCTT 920152 Query 122736 CTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795 ||| | ||| | || | | || || || |||||||| ||||||||||| ||||| Sbjct 920153 CTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAATACCCTCCACGGCAGCAAA 920212 Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTGCCCATT 122854 ||||| || | ||||| || || | | | | | | | |||| |||| ||||||| Sbjct 920213 CGCAACGAGTCTCTCGGC-AAACAGGGCTTCCTCGTCGTTGATCCATCTCATGGCCCATT 920271 Query 122855 TCGCCTTCTTCTCAATACATGG 122876 ||||||| || |||||||| Sbjct 920272 CGGCCTTCTCCTTGATACATGG 920293 Score = 95.1 bits (104), Expect = 2e-14 Identities = 124/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 164603 GTATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGC 164662 ||| || || ||||| || || || || || || || || ||||| ||| | ||||| Sbjct 149019 GTACGGACGCGTTGCTCCTCGTTCTGGACTTGCAGTCAAACATGGGATTTCAACAGGTGC 149078 Query 164663 GGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGA 164722 || || |||||| | |||||| || ||||| ||||||||||| ||||| ||| Sbjct 149079 CGGAGTCATTGATGCTGACTATCGTGGAGAAGTGAAAGTCGTTCTTTTCAACCACTCCAG 149138 Query 164723 CAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAG 164774 ||||||||||| | || |||| || ||||| ||||| ||| | || ||| Sbjct 149139 TAAAGACTTTGAAATCAACGAAGGTGACCGCATTGCACAGCTTATACTCGAG 149190 >seq1 Length=1541475 Score = 91.5 bits (100), Expect = 2e-13 Identities = 276/417 (66%), Gaps = 11/417 (3%) Strand=Plus/Minus Query 11444 ATCTTGCGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTA 11503 ||||| | ||||| || ||||| | || | || | || | | ||| | || || Sbjct 824887 ATCTTCCTGTCAAACCGGCCCGGTCTGAGCAATGCCTGGTCCAAAACATCGGCACGGTTC 824828 Query 11504 GTGGCCGCAATAACCACAATGCCAGTCTCAT-TGTCAAAGCCATCCATCTCGGTGAGTAA 11562 ||| |||||| ||||| | | |||| || || || || ||||||||| ||| | Sbjct 824827 GTGCCCGCAAGCACCACCACGT-AGTCAGATGTGGTGAAACCGTCCATCTCGACGAGCAG 824769 Query 11563 TTGATTAATTGTTTGTTCTCTCTCATCATT--TGCTGGCA-TACCACCAGC--ACTGCGT 11617 ||| || | || | ||||||||| || || ||| |||| ||| || || ||| Sbjct 824768 TTGGTTCAAGGTGTTTTCTCTCTCGTCGTTGCTGCCGGCAGTACGGCCTTTTGACCGCGA 824709 Query 11618 TGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCG 11677 |||||| | |||||| ||||| || | |||| ||| | || |||||||| || Sbjct 824708 --CTTGCCGATCGCATCGATCTCGTCCACAAAGATAATCGACGGCGCGTTTTCGCGCGCC 824651 Query 11678 ATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTT 11737 | | ||||| ||||| |||| || || || |||||||||||||||||||| | Sbjct 824650 GTCTTGAAGAGCTCGCGCACCCGCGACGCCCCGACTCCAACAAACATCTCCACAAACTCA 824591 Query 11738 GCGGCAG-AGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAG 11796 | ||| | | ||| | ||| || || | ||||| || | || || || | Sbjct 824590 GACCCAGAAACGCTGTA-GAACGGCACGCCCGCCTCACCGGCCGTCGCCTTCGCCAGCAT 824532 Query 11797 GGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 ||||||||||| || || || | |||| ||| || || ||||||||||| || Sbjct 824531 CGTCTTTCCCGTTCCCGGAGGGCCTGTCAGAATGGCTCCCCGCGGGATCTTGGCGCC 824475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031945047200