Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 345 5e-90 seq4 120 4e-22 >seq2 Length=1516309 Score = 345 bits (382), Expect = 5e-90 Identities = 1187/1825 (65%), Gaps = 47/1825 (3%) Strand=Plus/Plus Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887 |||| | || |||||||||||| || |||||||| || | ||||||| |||| | ||| Sbjct 916119 GCCTGGGTTCTGAGGTAGTACATGCCGGTCTTGAGTCCTTTCTTCCAGCCATAGAAGTGC 916178 Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 117947 || || | ||||||| | |||||| | | | | || ||||| || || || Sbjct 916179 ATCGACGTCAACTTGCCCATGGTTGGGTTCTTGAGGTGGATATTCATCGACTGCGACTGG 916238 Query 117948 TCGATGAA-GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 118006 |||||| | ||| | | | || |||||||| || || | ||| | || ||||| Sbjct 916239 TCGATGTACGCGCCTCTG-TCGGCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCCCA 916297 Query 118007 CACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCC 118066 || || | ||| |||| ||| | || | ||| | || | || ||||| || || Sbjct 916298 GACGGTGCGGTACAGGTCCTTCAACTCCTGTGGCACATTTGGCAAGTTCTGGATCGAGCC 916357 Query 118067 ACCCGCCTTGACCATGAGATCCTTCAT--ATCCTTTGACCAGAGACCAATCTTTTTGAGA 118124 |||||| |||| || |||||| | | || ||| | |||| || || Sbjct 916358 GTTGTCCTTGATGATGAAATTCTTCATCGAGTCGTT--CCACAATCCAAGGTTAACAAGG 916415 Query 118125 TCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAG 118184 ||| || | | | ||||| | |||||||| || || | ||| ||| Sbjct 916416 TCCCTCAGCAAGTACGGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAG 916475 Query 118185 ATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCT 118244 || |||| ||||| ||||| || ||||| || | ||||| || || | ||| || || Sbjct 916476 ATGTTGGAGGTGTAAGGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCG 916535 Query 118245 GTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTG 118304 || ||||| || |||| | || || | ||| || | | | || || ||||| Sbjct 916536 GTTGGCATAGGAGCCACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTG 916595 Query 118305 AGAGCGTCCCAGTCGTAGTTGAGCT-TTGTCTCCCCCTGCCACATA--TCAAACTGGAGG 118361 || | ||||||||| | || | ||| || | |||| || | || ||||| | Sbjct 916596 AGCGAGTCCCAGTCCCACA-GATCGGTTGGCTTCT--TGCCCCAAAGGTCGAACTGCAAA 916652 Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCT--CCGCCA 118419 ||||| || ||||| |||||||||||||| ||||| ||| ||| || ||| | |||| Sbjct 916653 ATACCCTGCGACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATC--CCTAACGGCCA 916710 Query 118420 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTG 118479 |||| ||||| | || |||| || || || || ||||| | |||| Sbjct 916711 GCTCGGCAGAGGCCTCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCT 916770 Query 118480 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 118539 | ||||||| || ||||| | |||| | || || || || || || || | Sbjct 916771 CTCTGGCCTCTGGTGAGTCAAAAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCT 916830 Query 118540 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA-CGGGA 118598 ||||||| | | |||| || | | | ||| || || | | || ||| | | ||| Sbjct 916831 GGACACCCACGGCAATCGGCCTGTTGCGCATGTTGGATGTTCTTGCC-TCTGGAACAGGA 916889 Query 118599 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 118658 ||| | || || ||||| | | | || || || || ||||||||||| ||||| | || Sbjct 916890 TAATAGTTTCTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGC 916949 Query 118659 AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT--ACTTAGG----AAGGGCG 118712 ||||||||| | | | | || || | || | | | || ||| ||||||| Sbjct 916950 AGCTTTTCGAAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCG 917009 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 || ||||||| ||||||||| | ||| || | | |||||| | |||||| | Sbjct 917010 ATCGACGCCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAG 917069 Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832 ||||| || || ||| ||| | || | |||||| || || | ||| | ||| || || Sbjct 917070 CACAAATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCG 917129 Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892 |||||||| |||||| ||||||| || || ||||| |||| || | ||| || | ||| Sbjct 917130 TCCTTGTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCAC 917189 Query 118893 A-CATCGGCAGCTGGCACAGT--GGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAG 118949 | | || | || | || || ||||| | || || || | ||||| | |||||| Sbjct 917190 AGCTTCTGTGCCTTG-ACCGTCTGGCGTC--CACGGCCTTCCTTTTCGTATCTGGTGTAG 917246 Query 118950 AGGGCTTCAAACTCTTCACC---CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAG 119006 || | | ||||| || || |||| || || |||||||| |||| || || Sbjct 917247 AGCTCCTTGAACTCGTCGCCGTACACG---TCGGAAAGCCCTGGAGCCTCGGAAGGCGAG 917303 Query 119007 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 119066 || || | ||| | | | || ||| || | || |||||| |||||||| ||||| ||| Sbjct 917304 AACAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGC 917363 Query 119067 GCCGAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 119125 || | ||| || || | | | || || || | | || || || || | || | Sbjct 917364 GCAGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCA-TGGTTCTTCCGGATGTCGAT 917422 Query 119126 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC------CGCGATTGACCCCTT 119179 |||||| | ||||||| |||||| || || | ||||| |||| | || ||| Sbjct 917423 AAAGTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTT 917482 Query 119180 ACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAAT 119239 | | || |||||| || || || || ||| ||| || || | | ||||||||| Sbjct 917483 --GTTG-CCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAAT 917539 Query 119240 GATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTG 119299 ||| || | ||| ||| || || || || |||| ||| ||| | | ||| Sbjct 917540 GATGCCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTG 917599 Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359 ||||||| |||||| || || || ||| ||||| | || || | |||| || | Sbjct 917600 AATGTGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTC 917659 Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419 ||||| || ||||| ||||| |||| | || | | ||| ||| ||||| || || Sbjct 917660 ATAGATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGG 917719 Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 119479 || ||||| || || || |||||||| | ||||||| |||| | ||| ||||| Sbjct 917720 ATGAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACAT 917779 Query 119480 CTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539 | || ||| ||||| | |||| ||||||||| || || || ||||| || | || || Sbjct 917780 CAGGTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACG 917839 Query 119540 CATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTT 119599 ||| | ||||| |||||| | || | | ||||| | | || ||| || | Sbjct 917840 CATGACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCG 917899 Query 119600 CTCCAAGGTCTTGAGACCAAAATAG 119624 ||||| ||||||| ||||||||| Sbjct 917900 CTCCAGCGTCTTGAAGCCAAAATAG 917924 >seq4 Length=1302532 Score = 120 bits (132), Expect = 4e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || || ||||||||||| | | |||| | || ||||||||| |||||| Sbjct 920075 GGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACC 920134 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| || || | |||||| | |||||| |||| ||| |||||||||||||| || Sbjct 920135 AGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAAT 920194 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAA 130193 |||||||| || ||||||| ||| | ||| ||||| || | | | || | | Sbjct 920195 ACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAA-CAGGGCTTCCTCGTCGTTGA 920253 Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCT 130241 ||| |||| ||||| | ||||| | || |||||| |||| ||||| Sbjct 920254 TCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCT 920301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435145886920