Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq2 392 4e-104
seq7 154 2e-32
seq1 141 1e-28
seq4 98.7 1e-15
>seq2
Length=1516309
Score = 392 bits (434), Expect = 4e-104
Identities = 1154/1753 (66%), Gaps = 59/1753 (3%)
Strand=Plus/Plus
Query 80044 AGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGC 80103
|| ||||||||||| |||||||| || ||||||||||| || | |||||| || | | |
Sbjct 916131 AGGTAGTACATGCCGGTCTTGAGTCCTTTCTTCCAGCCATAGAAGTGCATCGACGTCAAC 916190
Query 80104 TTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCC 80163
|| | | || ||||||| | | ||| |||| ||||| ||||| |||| | ||
Sbjct 916191 TTGCCCATGGTTGGGTTCTTGAGGTGGATATTCATCGACTGCGACTGGTCGATGTACGCG 916250
Query 80164 CCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGATAC 80223
|| | || |||||||| || ||||| || || ||||| ||||| || || || |||
Sbjct 916251 CCTCTGTCGGCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCCCAGACGGTGCGGTAC 916310
Query 80224 A---CCTTACGAAGCTCCTCTGGAA----TGTCCAGATTTTGCACACTGCCACCGTCCTT 80276
| |||| | ||||| ||| | || | || || || | ||| ||||||
Sbjct 916311 AGGTCCTTC---AACTCCTGTGGCACATTTGGCAAG-TTCTGGATCGAGCCGTTGTCCTT 916366
Query 80277 TACAATTTGATTTTTCAATTCAGACGT-CCAGACACCAAGCTTGTGCAGATCTTTCACAA 80335
| || ||| |||| | || ||| ||| | ||||| || || || ||| |
Sbjct 916367 GATGATGAAATTCTTCA-TCGAGTCGTTCCACAATCCAAGGTTAACAAGGTCCCTCAGCA 916425
Query 80336 GGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGAC-GCAGATACAGGTTTGTA 80394
|| | ||| | || ||||| || || || | | | || || | ||| |
Sbjct 916426 AGTACGGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAG-TAGATGTTGGAG 916484
Query 80395 GTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATC 80454
||||||||||| || |||||| | ||| | ||||| | || ||| || |||||
Sbjct 916485 GTGTAAGGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATA 916544
Query 80455 GGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATAT---CCTCGCGCAAATCT 80511
|| | ||||| || ||||| | || || | ||||| |||| ||| | || | ||
Sbjct 916545 GGAGCCACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCC 916604
Query 80512 GA---CCAAAAATCAACCCCAACGCTG-TGACCCCACATGTCGTGCTGCAAGATGCCCTC 80567
| ||| | ||| ||| | ||||| | |||| |||||| || ||||
Sbjct 916605 CAGTCCCACAGATCGGTTG----GCTTCTTGCCCCAAAGGTCGAACTGCAAAATACCCTG 916660
Query 80568 CGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTC---ACA 80624
||||||||| || ||| | || |||||||| ||| ||| | ||||||||| | |
Sbjct 916661 CGACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATCCCTAACGGCCAGCTCGGCAGA 916720
Query 80625 CGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGC 80684
| ||||| | ||| |||| || ||| ||| || | |||||| | | ||
Sbjct 916721 GGCCTCCAAA---GCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCTCTGGC 916777
Query 80685 CTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCC 80744
|| ||| ||| || | || | || | |||||||||||| ||||||||||| || ||
Sbjct 916778 CTCTGGTGAGTCAAAAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGGACACC 916837
Query 80745 GATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCCGGAATTGGGTAAAAGT 80803
| ||| ||||| | || |||| |||| ||| | || ||||| |||| || ||| |||
Sbjct 916838 CACGGCAATCGGCCTGTTGCGCATGTTGGAT-GTTCTTGCCTCTGGAACAGGATAATAGT 916896
Query 80804 TATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCT 80863
| | ||||||| ||| ||||| || |||||| || | | || || || |
Sbjct 916897 TTCTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTT 916956
Query 80864 GAAAGTCGAAT----TGGT-------TCCCCTTCA-CAAATGCCGGAAGGCTCAGGGACG 80911
|||| | | |||| || ||| | || || |||||| | ||||
Sbjct 916957 CGAAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCGATCGACG 917016
Query 80912 CCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAAT 80971
||| ||| |||||||||||||| || | | || ||||||| ||||| ||||||||
Sbjct 917017 CCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAGCACAAAT 917076
Query 80972 TAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGT 81031
|||| ||||| || |||| ||||| |||||||| | ||||| |||||| ||||||||||
Sbjct 917077 TAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTCCTTGT 917136
Query 81032 AGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGC 81091
| |||| | || || || || || ||| | || | ||||||| ||| | ||
Sbjct 917137 ACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAGCTTCT 917196
Query 81092 GCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCG 81150
| ||||||||| || ||| |||||| | || ||| ||| ||| || | |
Sbjct 917197 GTGCCTTGACCGTCTGGCGTCCACGGCCTTCCTTTTCGTATCTGGTGTAGAGC-TCCTTG 917255
Query 81151 AACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAG 81210
|||| | | |||| | || | || |||| |||| ||| | | ||| |||
Sbjct 917256 AACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACAGCGTCCAC 917315
Query 81211 TCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGG 81270
|| | || | ||| || || |||||| ||| || ||||| || || | |||||||
Sbjct 917316 TCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAGG 917375
Query 81271 TCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATG 81330
|| | | | |||||| | ||| ||||| || | |||| |||||| | ||
Sbjct 917376 TCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAAAATA 917435
Query 81331 TCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGAC----GGCCACCCTG 81386
|||| ||||||||||| | |||| || | || | || || | ||| |||||
Sbjct 917436 TCCGAGTGCCATGGCTCAACGTACAGAGCAAACG-CGCCAGGCCGCTTGTTGCCTCCCTG 917494
Query 81387 GTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTG 81446
|| |||||| | ||| || ||| || || | || ||| || ||||| || | |||
Sbjct 917495 GTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGT 917554
Query 81447 ACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTG-AAAGACCGA 81505
||||| || || |||| ||||| ||| | | ||| ||| || ||||| |
Sbjct 917555 GCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTG-TGAATGTGCAGACCAA 917613
Query 81506 TGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGA 81565
|||| || | ||| || ||| ||||||| || | ||| ||||| || || ||||
Sbjct 917614 TGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGTCGA 917673
Query 81566 TGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG--CC 81623
|| || | |||||| ||| |||||||||| |||||||| || | ||| ||
Sbjct 917674 TGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGG--ATGAGGAGTACC 917731
Query 81624 GGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGT 81683
|||||| ||||| ||||| | |||||| |||| | | |||||||||| || ||
Sbjct 917732 GGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGT 917791
Query 81684 TTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTA 81743
|| |||||| ||||| || || || || ||||| || || |||||||| | |||||
Sbjct 917792 CTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCATGACCATGTG 917851
Query 81744 CTGGGGCGTCTCG 81756
|||||| |||||
Sbjct 917852 CTGGGGTCTCTCG 917864
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || |||||||| | ||||| ||||| || || | ||||| |||||
Sbjct 177564 AATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCTTC 177505
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||| | || | ||| | || || || ||||| || ||||| ||||| |||||
Sbjct 177504 CGACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCTGACCA 177445
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||| | | || || || ||||||||||||||||| | | ||||| ||||||| ||
Sbjct 177444 GCAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGACTACAA 177385
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||||| || |||||| | ||| | || || | || | |||||
Sbjct 177384 CATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACTGAGAGGTGG 177337
>seq7
Length=988507
Score = 154 bits (170), Expect = 2e-32
Identities = 163/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27401 CTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGT 27460
||| |||||||||||| |||||||| || ||||| |||||||| || || ||||| ||||
Sbjct 50308 CTACAATGCAAATCTTCGTCAAGACCCTGACCGGTAAGACTATCACCCTCGAGGTGGAGT 50249
Query 27461 CAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAG 27520
| || | ||| | || | ||| | || || ||||||||||||||||| || || |
Sbjct 50248 CTTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCTG 50189
Query 27521 ACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580
||||||| | || ||||| ||||||||||| |||||||| | | || || | ||||
Sbjct 50188 ACCAGCAAAGACTGATTTTCGCTGGTAAGCAGCTCGAGGACGGCAGAACTCTTTCTGACT 50129
Query 27581 ATAATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615
| || |||| ||||| |||||| | || || |||
Sbjct 50128 ACAACATCCAGAAGGAGTCCACTTTGCACCTGGTC 50094
>seq1
Length=1541475
Score = 141 bits (156), Expect = 1e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || || || | ||||| ||||| || || |||||||||||||| |
Sbjct 445518 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445459
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| | |||||||| || ||||| ||||| || || ||||||
Sbjct 445458 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAG 445399
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || ||||| ||||||||||||||||| || | | | || || | ||||||||
Sbjct 445398 CAAAGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAAC 445339
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| |||||||| || || | ||||| || |||
Sbjct 445338 ATTCAAAAGGAGTCGACCTTGCATCTGGTTTTG 445306
Score = 134 bits (148), Expect = 2e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || || || | || || ||||| || || |||||||||||||| |
Sbjct 445290 ATGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445231
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | ||||||||||| ||||| ||||| || || ||||||
Sbjct 445230 GACACTATCGATAACGTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAG 445171
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || ||||||||||||||||| || || || | | | || || | || || ||
Sbjct 445170 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445111
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || |||||||| ||||||||| | || ||| | || | |||||
Sbjct 445110 ATTCAGAAGGAATCTACTCTTCATTTGGTTTTGAGACTGAGAGGTGG 445064
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || || || | ||||| ||||| || || |||||||||||||| |
Sbjct 445974 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445915
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| | |||||||| || ||||| ||||| ||||| ||||||
Sbjct 445914 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 445855
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || ||||||||||||||||| || || || | | | || || | || || ||
Sbjct 445854 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445795
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| |||||||| || || | || || || |||
Sbjct 445794 ATTCAAAAGGAGTCGACCTTGCACCTGGTTTTG 445762
Score = 113 bits (124), Expect = 5e-20
Identities = 118/155 (76%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || || || | ||||| ||||| || || |||||||||||||| |
Sbjct 445746 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445687
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| |||| ||||||||||||| || ||||| || || || || ||
Sbjct 445686 GACACTATCGATAATGTGAAATCTAAAATTCAGGATAAAGAGGGTATCCCGCCTGATCAA 445627
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGA 27560
||| | | ||||| ||||||||||||||||| ||
Sbjct 445626 CAGAGATTGATTTTCGCTGGTAAGCAACTCGAAGA 445592
Score = 102 bits (112), Expect = 9e-17
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || || ||||| | |||||||| ||||| ||| | ||||| || ||
Sbjct 446203 AATGCAGATTTTCGTTAAGACTTTGACCGGCAAAACTATCACTTTAGAGGTAGAATCTTC 446144
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | || | ||| | || | || ||||| || ||||| ||||| ||||| |||||
Sbjct 446143 TGACACTATCGATAATGTCAAATCGAAGATTCAAGATAAGGAAGGAATCCCTCCTGACCA 446084
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGA 27560
||| | || ||||||||||||||||| || || ||
Sbjct 446083 GCAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGA 446048
>seq4
Length=1302532
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/192 (72%), Gaps = 5/192 (3%)
Strand=Plus/Minus
Query 64666 AAGGCTGAATGGGCCATCCGGTGGATGAA--TCGTGG--GTCGTCGTTTGGTCAGCGTCT 64721
||||| ||||||||||| | ||||| || || || | | | ||||| || | ||
Sbjct 920278 AAGGCCGAATGGGCCATGAGATGGATCAACGACGAGGAAGCCCT-GTTTGCCGAGAGACT 920220
Query 64722 CGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTG 64781
|| || ||||| ||||| || |||||||| ||||| || || || || |||||
Sbjct 920219 CGTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGCTCGTTTGCCTCGATCTTCTG 920160
Query 64782 GCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGA 64841
||| || ||| | || |||||||| |||||| | || ||||||||| |||||| | ||
Sbjct 920159 GCTCAAGAAGAGAGGACTGATGCCTGGTCTGACCTTCTCGAACGAGTTGATCTGCAGAGA 920100
Query 64842 CGAGGGGCTCCA 64853
|||||| || ||
Sbjct 920099 CGAGGGTCTGCA 920088
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310350097840
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