Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2 392 4e-104 seq7 154 2e-32 seq1 141 1e-28 seq4 98.7 1e-15 >seq2 Length=1516309 Score = 392 bits (434), Expect = 4e-104 Identities = 1154/1753 (66%), Gaps = 59/1753 (3%) Strand=Plus/Plus Query 80044 AGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGC 80103 || ||||||||||| |||||||| || ||||||||||| || | |||||| || | | | Sbjct 916131 AGGTAGTACATGCCGGTCTTGAGTCCTTTCTTCCAGCCATAGAAGTGCATCGACGTCAAC 916190 Query 80104 TTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCC 80163 || | | || ||||||| | | ||| |||| ||||| ||||| |||| | || Sbjct 916191 TTGCCCATGGTTGGGTTCTTGAGGTGGATATTCATCGACTGCGACTGGTCGATGTACGCG 916250 Query 80164 CCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGATAC 80223 || | || |||||||| || ||||| || || ||||| ||||| || || || ||| Sbjct 916251 CCTCTGTCGGCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCCCAGACGGTGCGGTAC 916310 Query 80224 A---CCTTACGAAGCTCCTCTGGAA----TGTCCAGATTTTGCACACTGCCACCGTCCTT 80276 | |||| | ||||| ||| | || | || || || | ||| |||||| Sbjct 916311 AGGTCCTTC---AACTCCTGTGGCACATTTGGCAAG-TTCTGGATCGAGCCGTTGTCCTT 916366 Query 80277 TACAATTTGATTTTTCAATTCAGACGT-CCAGACACCAAGCTTGTGCAGATCTTTCACAA 80335 | || ||| |||| | || ||| ||| | ||||| || || || ||| | Sbjct 916367 GATGATGAAATTCTTCA-TCGAGTCGTTCCACAATCCAAGGTTAACAAGGTCCCTCAGCA 916425 Query 80336 GGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGAC-GCAGATACAGGTTTGTA 80394 || | ||| | || ||||| || || || | | | || || | ||| | Sbjct 916426 AGTACGGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAG-TAGATGTTGGAG 916484 Query 80395 GTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATC 80454 ||||||||||| || |||||| | ||| | ||||| | || ||| || ||||| Sbjct 916485 GTGTAAGGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATA 916544 Query 80455 GGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATAT---CCTCGCGCAAATCT 80511 || | ||||| || ||||| | || || | ||||| |||| ||| | || | || Sbjct 916545 GGAGCCACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCC 916604 Query 80512 GA---CCAAAAATCAACCCCAACGCTG-TGACCCCACATGTCGTGCTGCAAGATGCCCTC 80567 | ||| | ||| ||| | ||||| | |||| |||||| || |||| Sbjct 916605 CAGTCCCACAGATCGGTTG----GCTTCTTGCCCCAAAGGTCGAACTGCAAAATACCCTG 916660 Query 80568 CGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTC---ACA 80624 ||||||||| || ||| | || |||||||| ||| ||| | ||||||||| | | Sbjct 916661 CGACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATCCCTAACGGCCAGCTCGGCAGA 916720 Query 80625 CGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGC 80684 | ||||| | ||| |||| || ||| ||| || | |||||| | | || Sbjct 916721 GGCCTCCAAA---GCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCTCTGGC 916777 Query 80685 CTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCC 80744 || ||| ||| || | || | || | |||||||||||| ||||||||||| || || Sbjct 916778 CTCTGGTGAGTCAAAAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGGACACC 916837 Query 80745 GATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCCGGAATTGGGTAAAAGT 80803 | ||| ||||| | || |||| |||| ||| | || ||||| |||| || ||| ||| Sbjct 916838 CACGGCAATCGGCCTGTTGCGCATGTTGGAT-GTTCTTGCCTCTGGAACAGGATAATAGT 916896 Query 80804 TATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCT 80863 | | ||||||| ||| ||||| || |||||| || | | || || || | Sbjct 916897 TTCTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTT 916956 Query 80864 GAAAGTCGAAT----TGGT-------TCCCCTTCA-CAAATGCCGGAAGGCTCAGGGACG 80911 |||| | | |||| || ||| | || || |||||| | |||| Sbjct 916957 CGAAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCGATCGACG 917016 Query 80912 CCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAAT 80971 ||| ||| |||||||||||||| || | | || ||||||| ||||| |||||||| Sbjct 917017 CCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAGCACAAAT 917076 Query 80972 TAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGT 81031 |||| ||||| || |||| ||||| |||||||| | ||||| |||||| |||||||||| Sbjct 917077 TAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTCCTTGT 917136 Query 81032 AGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGC 81091 | |||| | || || || || || ||| | || | ||||||| ||| | || Sbjct 917137 ACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAGCTTCT 917196 Query 81092 GCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCG 81150 | ||||||||| || ||| |||||| | || ||| ||| ||| || | | Sbjct 917197 GTGCCTTGACCGTCTGGCGTCCACGGCCTTCCTTTTCGTATCTGGTGTAGAGC-TCCTTG 917255 Query 81151 AACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAG 81210 |||| | | |||| | || | || |||| |||| ||| | | ||| ||| Sbjct 917256 AACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACAGCGTCCAC 917315 Query 81211 TCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGG 81270 || | || | ||| || || |||||| ||| || ||||| || || | ||||||| Sbjct 917316 TCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAGG 917375 Query 81271 TCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATG 81330 || | | | |||||| | ||| ||||| || | |||| |||||| | || Sbjct 917376 TCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAAAATA 917435 Query 81331 TCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGAC----GGCCACCCTG 81386 |||| ||||||||||| | |||| || | || | || || | ||| ||||| Sbjct 917436 TCCGAGTGCCATGGCTCAACGTACAGAGCAAACG-CGCCAGGCCGCTTGTTGCCTCCCTG 917494 Query 81387 GTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTG 81446 || |||||| | ||| || ||| || || | || ||| || ||||| || | ||| Sbjct 917495 GTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGT 917554 Query 81447 ACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTG-AAAGACCGA 81505 ||||| || || |||| ||||| ||| | | ||| ||| || ||||| | Sbjct 917555 GCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTG-TGAATGTGCAGACCAA 917613 Query 81506 TGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGA 81565 |||| || | ||| || ||| ||||||| || | ||| ||||| || || |||| Sbjct 917614 TGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGTCGA 917673 Query 81566 TGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG--CC 81623 || || | |||||| ||| |||||||||| |||||||| || | ||| || Sbjct 917674 TGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGG--ATGAGGAGTACC 917731 Query 81624 GGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGT 81683 |||||| ||||| ||||| | |||||| |||| | | |||||||||| || || Sbjct 917732 GGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGT 917791 Query 81684 TTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTA 81743 || |||||| ||||| || || || || ||||| || || |||||||| | ||||| Sbjct 917792 CTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCATGACCATGTG 917851 Query 81744 CTGGGGCGTCTCG 81756 |||||| ||||| Sbjct 917852 CTGGGGTCTCTCG 917864 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| | ||||| ||||| || || | ||||| ||||| Sbjct 177564 AATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCTTC 177505 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | || | ||| | || || || ||||| || ||||| ||||| ||||| Sbjct 177504 CGACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCTGACCA 177445 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | | || || || ||||||||||||||||| | | ||||| ||||||| || Sbjct 177444 GCAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGACTACAA 177385 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||| || |||||| | ||| | || || | || | ||||| Sbjct 177384 CATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACTGAGAGGTGG 177337 >seq7 Length=988507 Score = 154 bits (170), Expect = 2e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27401 CTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGT 27460 ||| |||||||||||| |||||||| || ||||| |||||||| || || ||||| |||| Sbjct 50308 CTACAATGCAAATCTTCGTCAAGACCCTGACCGGTAAGACTATCACCCTCGAGGTGGAGT 50249 Query 27461 CAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAG 27520 | || | ||| | || | ||| | || || ||||||||||||||||| || || | Sbjct 50248 CTTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCTG 50189 Query 27521 ACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580 ||||||| | || ||||| ||||||||||| |||||||| | | || || | |||| Sbjct 50188 ACCAGCAAAGACTGATTTTCGCTGGTAAGCAGCTCGAGGACGGCAGAACTCTTTCTGACT 50129 Query 27581 ATAATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 | || |||| ||||| |||||| | || || ||| Sbjct 50128 ACAACATCCAGAAGGAGTCCACTTTGCACCTGGTC 50094 >seq1 Length=1541475 Score = 141 bits (156), Expect = 1e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | ||||| ||||| || || |||||||||||||| | Sbjct 445518 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445459 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | |||||||| || ||||| ||||| || || |||||| Sbjct 445458 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAG 445399 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || ||||| ||||||||||||||||| || | | | || || | |||||||| Sbjct 445398 CAAAGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAAC 445339 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | |||||||| || || | ||||| || ||| Sbjct 445338 ATTCAAAAGGAGTCGACCTTGCATCTGGTTTTG 445306 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | || || ||||| || || |||||||||||||| | Sbjct 445290 ATGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445231 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | ||||||||||| ||||| ||||| || || |||||| Sbjct 445230 GACACTATCGATAACGTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAG 445171 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || ||||||||||||||||| || || || | | | || || | || || || Sbjct 445170 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445111 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| ||||||||| | || ||| | || | ||||| Sbjct 445110 ATTCAGAAGGAATCTACTCTTCATTTGGTTTTGAGACTGAGAGGTGG 445064 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | ||||| ||||| || || |||||||||||||| | Sbjct 445974 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445915 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | |||||||| || ||||| ||||| ||||| |||||| Sbjct 445914 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 445855 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || ||||||||||||||||| || || || | | | || || | || || || Sbjct 445854 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445795 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | |||||||| || || | || || || ||| Sbjct 445794 ATTCAAAAGGAGTCGACCTTGCACCTGGTTTTG 445762 Score = 113 bits (124), Expect = 5e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | ||||| ||||| || || |||||||||||||| | Sbjct 445746 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445687 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| |||| ||||||||||||| || ||||| || || || || || Sbjct 445686 GACACTATCGATAATGTGAAATCTAAAATTCAGGATAAAGAGGGTATCCCGCCTGATCAA 445627 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGA 27560 ||| | | ||||| ||||||||||||||||| || Sbjct 445626 CAGAGATTGATTTTCGCTGGTAAGCAACTCGAAGA 445592 Score = 102 bits (112), Expect = 9e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || ||||| | |||||||| ||||| ||| | ||||| || || Sbjct 446203 AATGCAGATTTTCGTTAAGACTTTGACCGGCAAAACTATCACTTTAGAGGTAGAATCTTC 446144 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | || | ||| | || | || ||||| || ||||| ||||| ||||| ||||| Sbjct 446143 TGACACTATCGATAATGTCAAATCGAAGATTCAAGATAAGGAAGGAATCCCTCCTGACCA 446084 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGA 27560 ||| | || ||||||||||||||||| || || || Sbjct 446083 GCAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGA 446048 >seq4 Length=1302532 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/192 (72%), Gaps = 5/192 (3%) Strand=Plus/Minus Query 64666 AAGGCTGAATGGGCCATCCGGTGGATGAA--TCGTGG--GTCGTCGTTTGGTCAGCGTCT 64721 ||||| ||||||||||| | ||||| || || || | | | ||||| || | || Sbjct 920278 AAGGCCGAATGGGCCATGAGATGGATCAACGACGAGGAAGCCCT-GTTTGCCGAGAGACT 920220 Query 64722 CGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTG 64781 || || ||||| ||||| || |||||||| ||||| || || || || ||||| Sbjct 920219 CGTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGCTCGTTTGCCTCGATCTTCTG 920160 Query 64782 GCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGA 64841 ||| || ||| | || |||||||| |||||| | || ||||||||| |||||| | || Sbjct 920159 GCTCAAGAAGAGAGGACTGATGCCTGGTCTGACCTTCTCGAACGAGTTGATCTGCAGAGA 920100 Query 64842 CGAGGGGCTCCA 64853 |||||| || || Sbjct 920099 CGAGGGTCTGCA 920088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310350097840