Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq1 134 1e-26
seq2 113 4e-20
>seq1
Length=1541475
Score = 134 bits (148), Expect = 1e-26
Identities = 170/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || ||||| ||||||| ||| | || || ||||| || || | ||
Sbjct 445518 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445459
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| ||||||||||| || ||||| || || || || ||
Sbjct 445458 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAG 445399
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166
|| | | || | ||| || || ||| | |||||| || || |||| ||||| || ||
Sbjct 445398 CAAAGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTA-GAACGTTATCCGACTATAA 445340
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||||||||||||||| ||| |||||||| | ||| | ||||| ||
Sbjct 445339 CATTCAAAAGGAGTCGACCTTGCATCTGGTTTTGAGATTGAGAGGTGGTAT 445289
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || ||||| ||||||| ||| | || || ||||| || || | ||
Sbjct 445974 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445915
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| ||||||||||| || ||||| || || || || ||
Sbjct 445914 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 445855
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | || || || || | |||||| || || | ||||||||||||
Sbjct 445854 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445795
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||||||||||||||| || |||||||| | ||| | ||||| ||
Sbjct 445794 ATTCAAAAGGAGTCGACCTTGCACCTGGTTTTGAGATTGAGAGGTGGTAT 445745
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || ||||| ||||||| ||| | || || ||||| || || | ||
Sbjct 445746 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445687
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| |||||||| || ||||| || || || || ||||||
Sbjct 445686 GACACTATCGATAATGTGAAATCTAAAATTCAGGATAAAGAGGGTATCCCGCCTGATCAA 445627
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||| || || ||| | |||||| | || | || |||||||||
Sbjct 445626 CAGAGATTGATTTTCGCTGGTAAGCAACTCGAAGACGGCAGAACTCTGTCTGATTACAAC 445567
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||||| ||||| || |||| || | ||| | ||||| ||
Sbjct 445566 ATTCAGAAAGAGTCTACCTTGCACCTGGTCCTGAGATTGAGAGGTGGTAT 445517
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| |||||||||| |||| ||| | || || ||| | ||
Sbjct 446202 ATGCAGATTTTCGTTAAGACTTTGACCGGCAAAACTATCACTTTAGAGGTAGAATCTTCT 446143
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | |||||| || |||||||| || ||||| || || || || ||
Sbjct 446142 GACACTATCGATAATGTCAAATCGAAGATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 446083
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | || || || || | |||||| || || | ||||||||||||
Sbjct 446082 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 446023
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||||| ||||| || ||||| || | ||| | ||||| ||
Sbjct 446022 ATTCAGAAAGAGTCTACCTTGCACTTGGTCCTGAGATTGAGAGGTGGTAT 445973
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || ||||| |||| || ||| | || || ||||| || || | ||
Sbjct 445290 ATGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445231
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| |||||||| || || ||||| || || || || ||
Sbjct 445230 GACACTATCGATAACGTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAG 445171
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | || || || || | |||||| || || | ||||||||||||
Sbjct 445170 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445111
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| ||||| || || | |||||||||||| | || | |||||
Sbjct 445110 ATTCAGAAGGAATCTACTCTTCATTTGGTTTTGAGACTGAGAGGTGG 445064
>seq2
Length=1516309
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||||| ||| | || || | || || || | |||
Sbjct 177563 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCTTCC 177504
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || |||||||||||||| || || || || ||
Sbjct 177503 GACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCTGACCAG 177444
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | |||||| || ||| | || ||| | ||| |||| || ||||||
Sbjct 177443 CAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGACTACAAC 177384
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| ||||| || || ||||||||| || | || | ||||| ||
Sbjct 177383 ATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACTGAGAGGTGGTAT 177334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918361944640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |