Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1 134 1e-26 seq2 113 4e-20 >seq1 Length=1541475 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| ||||||| ||| | || || ||||| || || | || Sbjct 445518 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445459 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||||||||||| || ||||| || || || || || Sbjct 445458 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAG 445399 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 || | | || | ||| || || ||| | |||||| || || |||| ||||| || || Sbjct 445398 CAAAGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTA-GAACGTTATCCGACTATAA 445340 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||||||||||||| ||| |||||||| | ||| | ||||| || Sbjct 445339 CATTCAAAAGGAGTCGACCTTGCATCTGGTTTTGAGATTGAGAGGTGGTAT 445289 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| ||||||| ||| | || || ||||| || || | || Sbjct 445974 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445915 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||||||||||| || ||||| || || || || || Sbjct 445914 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 445855 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || || || || | |||||| || || | |||||||||||| Sbjct 445854 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445795 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||||||||| || |||||||| | ||| | ||||| || Sbjct 445794 ATTCAAAAGGAGTCGACCTTGCACCTGGTTTTGAGATTGAGAGGTGGTAT 445745 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| ||||||| ||| | || || ||||| || || | || Sbjct 445746 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445687 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| |||||||| || ||||| || || || || |||||| Sbjct 445686 GACACTATCGATAATGTGAAATCTAAAATTCAGGATAAAGAGGGTATCCCGCCTGATCAA 445627 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||| || || ||| | |||||| | || | || ||||||||| Sbjct 445626 CAGAGATTGATTTTCGCTGGTAAGCAACTCGAAGACGGCAGAACTCTGTCTGATTACAAC 445567 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| ||||| || |||| || | ||| | ||||| || Sbjct 445566 ATTCAGAAAGAGTCTACCTTGCACCTGGTCCTGAGATTGAGAGGTGGTAT 445517 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| |||||||||| |||| ||| | || || ||| | || Sbjct 446202 ATGCAGATTTTCGTTAAGACTTTGACCGGCAAAACTATCACTTTAGAGGTAGAATCTTCT 446143 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | |||||| || |||||||| || ||||| || || || || || Sbjct 446142 GACACTATCGATAATGTCAAATCGAAGATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 446083 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || || || || | |||||| || || | |||||||||||| Sbjct 446082 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 446023 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| ||||| || ||||| || | ||| | ||||| || Sbjct 446022 ATTCAGAAAGAGTCTACCTTGCACTTGGTCCTGAGATTGAGAGGTGGTAT 445973 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| |||| || ||| | || || ||||| || || | || Sbjct 445290 ATGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445231 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| |||||||| || || ||||| || || || || || Sbjct 445230 GACACTATCGATAACGTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAG 445171 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || || || || | |||||| || || | |||||||||||| Sbjct 445170 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445111 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| ||||| || || | |||||||||||| | || | ||||| Sbjct 445110 ATTCAGAAGGAATCTACTCTTCATTTGGTTTTGAGACTGAGAGGTGG 445064 >seq2 Length=1516309 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||| ||| | || || | || || || | ||| Sbjct 177563 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCTTCC 177504 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || |||||||||||||| || || || || || Sbjct 177503 GACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCTGACCAG 177444 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | |||||| || ||| | || ||| | ||| |||| || |||||| Sbjct 177443 CAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGACTACAAC 177384 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| ||||| || || ||||||||| || | || | ||||| || Sbjct 177383 ATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACTGAGAGGTGGTAT 177334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918361944640