Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq7 170 4e-37
seq2 165 2e-35
seq1 152 1e-31
seq6 113 1e-19
>seq7
Length=988507
Score = 170 bits (188), Expect = 4e-37
Identities = 171/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
||||| ||||| ||||| | ||||||||| || |||||||| || || | ||| || ||
Sbjct 50086 AGTCTGAGGACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTG 50145
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| || || |||||||| || ||||| || || | ||| |||||||| || | ||| |||
Sbjct 50146 CCGTCCTCGAGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATTCCCTCC 50205
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|||||||||||||| || ||||| ||||||||||| || || |||||||| |||
Sbjct 50206 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 50265
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118
|| ||||| || || || ||||| || || | |||||| ||
Sbjct 50266 ATAGTCTTACCGGTCAGGGTCTTGACGAAGATTTGCATTGTA 50307
>seq2
Length=1516309
Score = 165 bits (182), Expect = 2e-35
Identities = 169/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
||||| || || | || | ||||||||||||||||||||| || || | |||||| ||
Sbjct 177346 AGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAAAGGGTTCTG 177405
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| || || || ||||| || |||||||| | | ||| ||||||||||| | ||||||
Sbjct 177406 CCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGGATTCCTTCT 177465
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
||||| |||||||| || ||||| ||||||||||| || || ||||| | |||
Sbjct 177466 TTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACCTCCAAGGTG 177525
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| |||||||| || | ||||| || || | |||||||||
Sbjct 177526 ATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCATTTT 177566
>seq1
Length=1541475
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| ||||| | ||| | || |||||||| || ||||| ||||| | || || || ||
Sbjct 445987 TCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGACAGAGTTCTACC 446046
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||| |||||||| || || || || || | ||| ||||||||||| | |||||||||
Sbjct 446047 GTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTT 446106
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|| || ||||| ||| || || ||||| |||||||| ||| ||||| | ||||||
Sbjct 446107 ATCTTGAATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTACCTCTAAAGTGAT 446166
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || || || | |||||| || || | |||||||||
Sbjct 446167 AGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCATTTT 446205
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
|| ||||| | || ||||| ||||| ||||| ||||| | || || || || |||||
Sbjct 445766 ACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCT 445825
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
|||||||| || || || || || | ||| ||||||||||| | ||||||||| || ||
Sbjct 445826 AGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGA 445885
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
|| || || || || ||||| ||||||||| |||||||| || ||||| ||||||
Sbjct 445886 ATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTT 445945
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || | || || || || | |||||
Sbjct 445946 CCGGTCAAGGTTTTAACGAAAATTTGCAT 445974
>seq6
Length=996047
Score = 113 bits (124), Expect = 1e-19
Identities = 392/600 (65%), Gaps = 15/600 (3%)
Strand=Plus/Plus
Query 139431 AATGTTGACCAACGAACATGGTACAGCCTCAAACATTAAGTCGCGAGTCAACAGGCTTTC 139490
|||||||||| | ||| ||||||||||||| || ||||| ||||| |||||||| |||||
Sbjct 696878 AATGTTGACCGATGAATATGGTACAGCCTCCAATATTAAATCGCGTGTCAACAGACTTTC 696937
Query 139491 TGTTCTTGGGGCGATCGTCTCTTGCCAGCAAAAGTTAAAACTTTTACGGGAC-GTCCCAA 139549
||| ||| || ||| || ||||||||| || |||| ||||| | | || || |
Sbjct 696938 TGTGCTTTCTGCCATCACGTCGACCCAGCAAAAATTGAAAC-TTTACAGCTCTGTTCCTA 696996
Query 139550 AGAACGGACTTGTAATTTTTAGCGGAAGTGTTATGCTTCCCG---AAGGCAAGGAGAAAA 139606
| |||||||| || || | | || |||| | ||| |||| || ||||| |
Sbjct 696997 AAAACGGACTGGTTATCTACTGTGGTGAAGTTA---TCACCGAACAAGGTAAAGAGAAGA 697053
Query 139607 AGGTTG--CATTCGACATTGAACCTTTCCGTCCAATCAGCCAGAAAGTTTACGCATGCGA 139664
| ||| |||| | | || |||||| || || | | | ||| |||||
Sbjct 697054 A-ATTGACCATT-GGTTTCGAGCCTTTCAAGCCCATTAATACGTCTTTGTACCTGTGCGA 697111
Query 139665 CAGTGTTTTCCATACGGATTGTCTGAAAGATCTGTTGTATGATGACCAATCTTATGGTTT 139724
|| |||||||| || || || ||||| | |||| | | || ||
Sbjct 697112 CAACAAGTTCCATACCGAGGCGCTTTCTGAGTTGTTGGAGAGTGACGATAGATTCGGGTT 697171
Query 139725 TATTATCGTGGATGGCTCCGGTGTTTTATTTGCGACTCTTTCAGGAAGTACAAGAACAAC 139784
||| || |||| || ||| | ||| |||| || || | || | || ||| |
Sbjct 697172 CATTGTCATGGACGGTAACGGAGCTTTGTTTGGTACGCTCTGTGGCAACACCAGAGAAGT 697231
Query 139785 AATCTCGAGTTTCCAAGTTTGCCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCT 139844
| | ||| ||| |||||||||||||||||||||||| || |||||||| |
Sbjct 697232 GTTGCACAAATTCACAGTCGACCTTCCAAAGAAGCACGGAAGAGGTGGTCAATCTGCATT 697291
Query 139845 GCGTTTTGAAAGACTTCGAAAGGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAA 139904
|||||| ||| | || | ||||| || ||||| || | ||||| || || |||
Sbjct 697292 GCGTTTCTCGAGATTGAGAGATGAAAAAAGACACAATTATGTTAGAAAGGTGGCCGAGGT 697351
Query 139905 CGCAATACAGTGTTTTATCAAAGACAACAAGTGTTTTGTTTCTGGTATTG-TTTTGGCAG 139963
|| | ||| ||| |||| | ||||| ||| | || |||| |||||||||
Sbjct 697352 GGCTGTTCAGAATTTCATCACCGGAGACAAGGTCAACGTTGCCGG-ATTGATTTTGGCAG 697410
Query 139964 GTTCCGCAGAGTTCAAGACAAAGCTCCTGGAATCTGACTTTTTTGACCCGAGGCT-CAAG 140022
|| || || |||||||| |||| ||||||| | || || | |||||| ||||
Sbjct 697411 GTAGTGCCGATTTCAAGACGGAGCTGAGTAGATCTGACATGTTCGATCAGAGGCTGCAAG 697470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151896038555
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |