Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1 134 9e-27
seq2 96.9 2e-15
>seq1
Length=1541475
Score = 134 bits (148), Expect = 9e-27
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| ||||||||||||||| | || ||||| || ||||| || || ||||| ||| |
Sbjct 445746 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445687
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| | || ||| | ||| | |||| || || ||||| ||| | ||||| |||||
Sbjct 445686 GACACTATCGATAATGTGAAATCTAAAA-TTCAGGATAAAGAGGGTATCCCGCCTGATCA 445628
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | || || || || || || ||||| ||||||| | ||| | ||||||||
Sbjct 445627 ACAGAGATTGATTTTCGCTGGTAAGCAACTCGAAGACGGCAGAACTCTGTCTGATTACAA 445568
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || |||||||| || || || | || | || ||| |||| ||
Sbjct 445567 CATTCAGAAAGAGTCTACCTTGCACCTGGTCCTGAGATTGAGAGGTGG 445520
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| ||||||||||||||| | || ||||| || ||||| || || ||||| ||| |
Sbjct 445518 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445459
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| | || ||| | || | |||||| || || ||||| | || || || ||
Sbjct 445458 GACACTATCGATAATGTCAAGTC-CAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCA 445400
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| | | || || || || || ||||| ||||||| | || ||| ||| || ||
Sbjct 445399 GCAAAGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAA 445340
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| ||||| ||||| || || ||| | ||||| || ||| |||| ||
Sbjct 445339 CATTCAAAAGGAGTCGACCTTGCATCTGGTTTTGAGATTGAGAGGTGG 445292
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| ||||||||||||||| | || ||||| || ||||| || || ||||| ||| |
Sbjct 445974 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445915
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| | || ||| | || | |||| || || || ||||| | || || || ||
Sbjct 445914 GACACTATCGATAATGTCAAGTCCAAAA-TTCAAGATAAGGAAGGAATCCCTCCTGACCA 445856
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| | | || ||||| || || || || ||||||| | ||| | |||||||||
Sbjct 445855 GCAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAA 445796
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| ||||| ||||| || || || | ||||| || ||| |||| ||
Sbjct 445795 CATTCAAAAGGAGTCGACCTTGCACCTGGTTTTGAGATTGAGAGGTGG 445748
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| ||||||||||||||| | || ||||| || ||||| || || ||||| ||| |
Sbjct 445290 ATGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445231
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| | || | | || |||||| || || ||||| | || || || ||
Sbjct 445230 GACACTATCGATAACGTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAG 445171
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| | | || ||||| || || || || ||||||| | ||| | ||||||||||
Sbjct 445170 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445111
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| || || || || || | ||||| ||||| || || |||| ||
Sbjct 445110 ATTCAGAAGGAATCTACTCTTCATTTGGTTTTGAGACTGAGAGGTGG 445064
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|||||||||||||||||||| || | || || ||||| |||||| | || || || ||
Sbjct 446205 AAAATGCAGATTTTCGTTAAGACTTTGACCGGCAAAACTATCACTTTAGAGGTAGAATCT 446146
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| |||||| | || ||| | ||| | || | || || || ||||| | || || ||
Sbjct 446145 TCTGACACTATCGATAATGTCAAATCGAAGA-TTCAAGATAAGGAAGGAATCCCTCCTGA 446087
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| || | | || ||||| || || || || ||||||| | ||| | ||||||
Sbjct 446086 CCAGCAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTA 446027
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||||| || |||||||| || || || || || | || ||| |||| ||
Sbjct 446026 CAACATTCAGAAAGAGTCTACCTTGCACTTGGTCCTGAGATTGAGAGGTGG 445976
>seq2
Length=1516309
Score = 96.9 bits (106), Expect = 2e-15
Identities = 163/235 (69%), Gaps = 1/235 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| || ||| | || ||||| || ||||| | || || || ||
Sbjct 177566 AAAATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCT 177507
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| | || | | || || || ||||||||||| | || || ||
Sbjct 177506 TCCGACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCTGAC 177447
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | || || || ||||| || ||||| || |||| | || | || |||
Sbjct 177446 CAGCAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGACTAC 177387
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG-ATCA 23841
||||| |||||||||||||| || ||||| ||| | || || |||| || ||||
Sbjct 177386 AACATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACTGAGAGGTGGTATCA 177332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009571163556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |