Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2 190 3e-43 seq3 170 3e-37 >seq2 Length=1516309 Score = 190 bits (210), Expect = 3e-43 Identities = 430/640 (67%), Gaps = 10/640 (2%) Strand=Plus/Plus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 |||| | ||| || || || || ||||| || ||| || || |||| || ||| Sbjct 917331 ACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAGGTCTCTGGCTCTGATC 917390 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 || || || || ||||| | |||| ||| || | |||||| || |||||||| Sbjct 917391 TCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAAAATATCCGAGTGCCATGGC 917450 Query 78123 TCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCG 78182 || | || | || | | ||||| || || || |||||||| || | ||||||||| Sbjct 917451 TCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCCCTGGTCGACGTATCTGGCG 917510 Query 78183 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAA 78242 ||||| || | ||||||| ||||||||| || ||||| || || || || ||||||| Sbjct 917511 GTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGTGCCGTTGGTTCCAGCG 917570 Query 78243 ATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTA 78302 || ||| || | | | ||| || |||| | || || ||||| || ||| Sbjct 917571 ATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGACCAATGCCTCCAGCAGCCTTG 917630 Query 78303 GATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATG 78362 || || ||||| || || | || || ||||| || || || ||| ||| ||||| Sbjct 917631 GAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGTCGATGGAGTCGTCCTTCATG 917690 Query 78363 TTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGA 78422 || | |||||| |||||| || ||||| ||| || |||||||| | || || Sbjct 917691 GCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTACCGGCATTAAACAGAGTTGGC 917750 Query 78423 GATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAAT--AGCTGATTCTA 78480 || || || || || |||||| || | || ||||| || || || |||| | Sbjct 917751 GACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGTCTCGATGACGCTG--GGAA 917808 Query 78481 TGTCCCATTG--ATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAAC 78538 ||| ||| | ||| || || | || |||||||| | ||| ||||| ||||| || Sbjct 917809 TGT--CATCGCCATGGATACCAATGGCCACACGCATGACCATGTGCTGGGGTCTCTC-GG 917865 Query 78539 CGTCTTAT-TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGT 78597 || ||| | || || ||||| | ||||| |||| || || || |||||||||| Sbjct 917866 CGACTTTTCCATCAATCTTCAAGAGATATGACCGCTCCAGCGTCTTGAAGCCAAAATAGT 917925 Query 78598 TGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAG 78637 |||| ||||||||||| ||||| | || |||| || || Sbjct 917926 TGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTTCAG 917965 >seq3 Length=1363476 Score = 170 bits (188), Expect = 3e-37 Identities = 600/915 (66%), Gaps = 24/915 (3%) Strand=Plus/Minus Query 77689 CTAGATTACAAACTGCTA---CCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATA 77745 ||||||| || |||||| ||||||||| | ||||| | || || ||| | Sbjct 659384 CTAGATTGCAGACTGCTGTTTCCTCATTAGAT---GAATATTCAACGATTTCACAACAGA 659328 Query 77746 GATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCT 77805 |||| | ||||| || |||| |||||| ||||| |||||||||||| | ||| | Sbjct 659327 GATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATTGCAGGCGTCTT 659268 Query 77806 TATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGA 77865 | || || | || || ||||| ||||| |||| || | | || | | ||| | | Sbjct 659267 TGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGCATGCCACA-GT 659209 Query 77866 CTCTAG-CTTTTATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGT 77924 ||| | |||| | || | || || | ||| | |||||| | || ||| Sbjct 659208 TTCTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACCTGTTGTAAAGCTTG 659149 Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATT-TGGGCACATCAATG- 77982 ||||||||||||| || ||| | |||||| ||| || | || | | || | Sbjct 659148 ACAAATTCATCTCCATAAGTGTCACTGAGTCCAGGAGATTGATCCTCGGAAAA--AAGGC 659091 Query 77983 ACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAA 78042 |||| || ||||| || ||| | |||||| | ||| |||||||| |||||| || Sbjct 659090 ACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTATCCAAAGAGCATAAA 659031 Query 78043 ATAGATCTCGGGTTCTATGTTCTTCATTTCC-TGTATTCTTTTTAAGATCGAGAAACTCC 78101 ||| ||||| | | | |||||| ||||| || || | | ||| || || ||||| Sbjct 659030 ATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCAAG-TCCAGGAACTCA 658972 Query 78102 ATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA-CTCCAGGTCGTTTATTACC 78160 | | || | |||||| || |||| ||| || || | || | || |||| |||||| || Sbjct 658971 AACACGTCTGCATGCCACGGCTCTAAATACAT-GCAAAAAGCGCCTGGTCTTTTATTTCC 658913 Query 78161 TCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTT 78220 || ||||| | || | |||||| | ||| | ||| | ||| || | || ||||| Sbjct 658912 ACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCATAGGCACAAGTCCGTT 658853 Query 78221 AGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATAT 78280 ||||| ||||| ||||||||||| ||| || || || || || || | ||| Sbjct 658852 GGATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGATGTTTGAAACGTGTAT 658793 Query 78281 CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAAT-GTATCGTAGATAC 78339 || ||||| || ||| ||||| || || ||| || | | ||| || | | || | Sbjct 658792 GCCAATTCCGCCAGCCGCTTTAGAAATCAGGGCG-GACTTGTGAATCGTTCTGAAAATGC 658734 Query 78340 CCTCTATACTGTCATCCAT-CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACA 78398 | | |||| ||| |||| ||| ||||||||||||| || | | | | | Sbjct 658733 CATTTATAGAGTC-CCCATCCATTGCAAGAAGAAAACAGGAGGATAAATTAGGCGTTTCG 658675 Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || || || || | || || || ||||| | || ||||||| || | || || Sbjct 658674 GTACCGGCGTTGAACAGCGTAGGCGAAGCATGGATGAAGTATTTTTCGGACATAAGTCTG 658615 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 |||||||| | | | ||||| | | || || || || | || || | ||| ||| Sbjct 658614 TATGTTTCGAGAACGCGGTCTATATTACCTTTGTGTATCCCAATGGCCACTCTCATAAAC 658555 Query 78519 ATATGCTGAG--GTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 78576 | || ||||| |||| ||| ||||| || ||||| | ||| |||||| |||||| Sbjct 658554 AAATACTGAGGAGTCTCGCAA-GGTCTT-CCATCCATTTTTAGCAAATATGATCTTTCCA 658497 Query 78577 AAGTTTTAAAACCAA 78591 ||| | ||||||| Sbjct 658496 TTGTTCTGAAACCAA 658482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668739216480