Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq2 190 3e-43
seq3 170 3e-37
>seq2
Length=1516309
Score = 190 bits (210), Expect = 3e-43
Identities = 430/640 (67%), Gaps = 10/640 (2%)
Strand=Plus/Plus
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
|||| | ||| || || || || ||||| || ||| || || |||| || |||
Sbjct 917331 ACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAGGTCTCTGGCTCTGATC 917390
Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122
|| || || || ||||| | |||| ||| || | |||||| || ||||||||
Sbjct 917391 TCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAAAATATCCGAGTGCCATGGC 917450
Query 78123 TCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCG 78182
|| | || | || | | ||||| || || || |||||||| || | |||||||||
Sbjct 917451 TCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCCCTGGTCGACGTATCTGGCG 917510
Query 78183 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAA 78242
||||| || | ||||||| ||||||||| || ||||| || || || || |||||||
Sbjct 917511 GTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGTGCCGTTGGTTCCAGCG 917570
Query 78243 ATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTA 78302
|| ||| || | | | ||| || |||| | || || ||||| || |||
Sbjct 917571 ATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGACCAATGCCTCCAGCAGCCTTG 917630
Query 78303 GATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATG 78362
|| || ||||| || || | || || ||||| || || || ||| ||| |||||
Sbjct 917631 GAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGTCGATGGAGTCGTCCTTCATG 917690
Query 78363 TTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGA 78422
|| | |||||| |||||| || ||||| ||| || |||||||| | || ||
Sbjct 917691 GCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTACCGGCATTAAACAGAGTTGGC 917750
Query 78423 GATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAAT--AGCTGATTCTA 78480
|| || || || || |||||| || | || ||||| || || || |||| |
Sbjct 917751 GACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGTCTCGATGACGCTG--GGAA 917808
Query 78481 TGTCCCATTG--ATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAAC 78538
||| ||| | ||| || || | || |||||||| | ||| ||||| ||||| ||
Sbjct 917809 TGT--CATCGCCATGGATACCAATGGCCACACGCATGACCATGTGCTGGGGTCTCTC-GG 917865
Query 78539 CGTCTTAT-TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGT 78597
|| ||| | || || ||||| | ||||| |||| || || || ||||||||||
Sbjct 917866 CGACTTTTCCATCAATCTTCAAGAGATATGACCGCTCCAGCGTCTTGAAGCCAAAATAGT 917925
Query 78598 TGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAG 78637
|||| ||||||||||| ||||| | || |||| || ||
Sbjct 917926 TGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTTCAG 917965
>seq3
Length=1363476
Score = 170 bits (188), Expect = 3e-37
Identities = 600/915 (66%), Gaps = 24/915 (3%)
Strand=Plus/Minus
Query 77689 CTAGATTACAAACTGCTA---CCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATA 77745
||||||| || |||||| ||||||||| | ||||| | || || ||| |
Sbjct 659384 CTAGATTGCAGACTGCTGTTTCCTCATTAGAT---GAATATTCAACGATTTCACAACAGA 659328
Query 77746 GATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCT 77805
|||| | ||||| || |||| |||||| ||||| |||||||||||| | ||| |
Sbjct 659327 GATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATTGCAGGCGTCTT 659268
Query 77806 TATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGA 77865
| || || | || || ||||| ||||| |||| || | | || | | ||| | |
Sbjct 659267 TGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGCATGCCACA-GT 659209
Query 77866 CTCTAG-CTTTTATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGT 77924
||| | |||| | || | || || | ||| | |||||| | || |||
Sbjct 659208 TTCTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACCTGTTGTAAAGCTTG 659149
Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATT-TGGGCACATCAATG- 77982
||||||||||||| || ||| | |||||| ||| || | || | | || |
Sbjct 659148 ACAAATTCATCTCCATAAGTGTCACTGAGTCCAGGAGATTGATCCTCGGAAAA--AAGGC 659091
Query 77983 ACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAA 78042
|||| || ||||| || ||| | |||||| | ||| |||||||| |||||| ||
Sbjct 659090 ACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTATCCAAAGAGCATAAA 659031
Query 78043 ATAGATCTCGGGTTCTATGTTCTTCATTTCC-TGTATTCTTTTTAAGATCGAGAAACTCC 78101
||| ||||| | | | |||||| ||||| || || | | ||| || || |||||
Sbjct 659030 ATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCAAG-TCCAGGAACTCA 658972
Query 78102 ATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA-CTCCAGGTCGTTTATTACC 78160
| | || | |||||| || |||| ||| || || | || | || |||| |||||| ||
Sbjct 658971 AACACGTCTGCATGCCACGGCTCTAAATACAT-GCAAAAAGCGCCTGGTCTTTTATTTCC 658913
Query 78161 TCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTT 78220
|| ||||| | || | |||||| | ||| | ||| | ||| || | || |||||
Sbjct 658912 ACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCATAGGCACAAGTCCGTT 658853
Query 78221 AGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATAT 78280
||||| ||||| ||||||||||| ||| || || || || || || | |||
Sbjct 658852 GGATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGATGTTTGAAACGTGTAT 658793
Query 78281 CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAAT-GTATCGTAGATAC 78339
|| ||||| || ||| ||||| || || ||| || | | ||| || | | || |
Sbjct 658792 GCCAATTCCGCCAGCCGCTTTAGAAATCAGGGCG-GACTTGTGAATCGTTCTGAAAATGC 658734
Query 78340 CCTCTATACTGTCATCCAT-CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACA 78398
| | |||| ||| |||| ||| ||||||||||||| || | | | | |
Sbjct 658733 CATTTATAGAGTC-CCCATCCATTGCAAGAAGAAAACAGGAGGATAAATTAGGCGTTTCG 658675
Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458
|| || || || || | || || || ||||| | || ||||||| || | || ||
Sbjct 658674 GTACCGGCGTTGAACAGCGTAGGCGAAGCATGGATGAAGTATTTTTCGGACATAAGTCTG 658615
Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518
|||||||| | | | ||||| | | || || || || | || || | ||| |||
Sbjct 658614 TATGTTTCGAGAACGCGGTCTATATTACCTTTGTGTATCCCAATGGCCACTCTCATAAAC 658555
Query 78519 ATATGCTGAG--GTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 78576
| || ||||| |||| ||| ||||| || ||||| | ||| |||||| ||||||
Sbjct 658554 AAATACTGAGGAGTCTCGCAA-GGTCTT-CCATCCATTTTTAGCAAATATGATCTTTCCA 658497
Query 78577 AAGTTTTAAAACCAA 78591
||| | |||||||
Sbjct 658496 TTGTTCTGAAACCAA 658482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668739216480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |