Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq2 199 6e-46
seq3 168 1e-36
>seq2
Length=1516309
Score = 199 bits (220), Expect = 6e-46
Identities = 364/527 (69%), Gaps = 6/527 (1%)
Strand=Plus/Plus
Query 76691 AACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTA 76750
|| || | |||||| || |||||||| || | || | || | | || || || ||
Sbjct 917424 AAGTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTG 917483
Query 76751 TTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATG 76810
|| |||||||| || | |||||||| ||||| || | ||||||| ||||||||| |||
Sbjct 917484 TTGCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATG 917543
Query 76811 CCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATA 76870
||||| || || || || ||||||| || ||| || | | ||| || |||
Sbjct 917544 CCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATG 917603
Query 76871 GATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAG 76930
|| || || ||||| || || ||||| ||||||||| || | |||||||||
Sbjct 917604 TGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAG 917663
Query 76931 ATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGA 76990
||||| || || || ||| ||||| || | |||||| |||||| || |||||
Sbjct 917664 ATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGA 917723
Query 76991 ACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGA 77050
||| || |||||||||| || || || || || ||||| |||||| || | ||
Sbjct 917724 GGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGG 917783
Query 77051 TTGTATGTTTCAATAACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCA 77108
||||| || || || || ||| | || ||| | ||| || || | || |||||||
Sbjct 917784 TTGTACGTCTCGATGAC-GCTGGGA-ATGTCATCGCCATGGATACCAATGGCCACACGCA 917841
Query 77109 TCAACATATGCTGAGGTCGTTCTACAGTCTTAT-TATTTATTTTCAACAAGTATGATTTT 77167
| | ||| ||||| |||| || | | ||| | || || ||||| | |||||
Sbjct 917842 TGACCATGTGCTGGGGTCTCTCGGC-GACTTTTCCATCAATCTTCAAGAGATATGACCGC 917900
Query 77168 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 77214
|||| || || || |||||||||||||| ||||||||||| |||||
Sbjct 917901 TCCAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTA 917947
>seq3
Length=1363476
Score = 168 bits (186), Expect = 1e-36
Identities = 609/929 (66%), Gaps = 24/929 (3%)
Strand=Plus/Minus
Query 76270 AAGAGCTATAGATGCTAGATTACAAACGGCTA---CCTCATTAGCATTGGCATATTGTAT 76326
||| || | ||| ||||||| || || ||| ||||||||| || | ||||| |
Sbjct 659398 AAGTGCCAAAGAGCCTAGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAAC 659342
Query 76327 TATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTT 76386
|| || || ||||| ||||||| || || | |||||| ||||| ||||||
Sbjct 659341 GATTTCACAACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTT 659282
Query 76387 GTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAAT 76446
|| || | ||| || || || | || || || || ||||| |||| || | | ||
Sbjct 659281 ATTGCAGGCGTCTTTGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTAT 659222
Query 76447 AGATTTCCAGACGACTCTAG-CTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATAT- 76504
| | ||| | | ||| | |||| | | || | || || ||| | ||||||
Sbjct 659221 CGCATGCCACA-GTTTCTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACC 659163
Query 76505 TGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCAT-- 76562
||| | || | | ||||||||||||| || ||| | |||||| ||| ||
Sbjct 659162 TGT-TGTAAAGCTTGACAAATTCATCTCCATAAGTGTCACTGAGTCCAGGAGATTGATCC 659104
Query 76563 TCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTA 76622
||||| | | | ||||||| ||||| || || | |||||| | ||| ||||
Sbjct 659103 TCGGAAAAA--AGGCACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTA 659046
Query 76623 TCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC-TGTATTCTTTTTA 76681
|||| |||||| ||||| ||||| | | | |||||| ||||| || || | | |
Sbjct 659045 TCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCA 658986
Query 76682 AGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAA-CACC 76740
|| || |||||||| | | || | |||||| || |||| ||| || || | || | ||
Sbjct 658985 AG-TCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACAT-GCAAAAAGCGCC 658928
Query 76741 CGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACAT 76800
|||| |||||| || || ||||| | || | || ||| | ||| | ||| | |||
Sbjct 658927 TGGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCAT 658868
Query 76801 TGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAAT 76860
|| | || ||||| ||||||||||| ||||||||||| ||| || || || ||
Sbjct 658867 AGGCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGAT 658808
Query 76861 ATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAA 76920
|| || || ||| ||||| || ||| |||||| || || || | | | | ||
Sbjct 658807 GTTTGAAACGTGTATGCCAATTCCGCCAGCCGCTTTAGAAATCAGGGCGGA-CTTGTGAA 658749
Query 76921 T-GTGTCATAGATGCCCTCTATACTATCATCCAT-CATGTTAAGAAGAAAACAGCTAGAC 76978
| || | ||||| | |||| || |||| ||| ||||||||||||| ||
Sbjct 658748 TCGTTCTGAAAATGCCATTTATAGAGTC-CCCATCCATTGCAAGAAGAAAACAGGAGGAT 658690
Query 76979 ATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTT 77038
| | | | | || || || || |||| ||||| || ||||| |||| |||||
Sbjct 658689 AAATTAGGCGTTTCGGTACCGGCGTTGAACAGCGTAGGCGAAGCATGGATGAAGTATTTT 658630
Query 77039 TCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACA 77098
|| || | || |||||||||| | ||| ||||||| | || || || || |
Sbjct 658629 TCGGACATAAGTCTGTATGTTTCGAGAACGCGGTCTATATTACCTTTGTGTATCCCAATG 658570
Query 77099 GCGACACGCATCAACATATGCTGAGGTCGTTC-TACAGTCTTATTATTTATTTTCAACAA 77157
|| || | ||| |||| || |||||| || | ||||| || ||||| | |||
Sbjct 658569 GCCACTCTCATAAACAAATACTGAGGAGTCTCGCAAGGTCTT-CCATCCATTTTTAGCAA 658511
Query 77158 GTATGATTTTTCCAAAGTTTTAAAACCAA 77186
|||||| |||||| ||| | |||||||
Sbjct 658510 ATATGATCTTTCCATTGTTCTGAAACCAA 658482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712934337618240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |