Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2 199 6e-46 seq3 168 1e-36 >seq2 Length=1516309 Score = 199 bits (220), Expect = 6e-46 Identities = 364/527 (69%), Gaps = 6/527 (1%) Strand=Plus/Plus Query 76691 AACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTA 76750 || || | |||||| || |||||||| || | || | || | | || || || || Sbjct 917424 AAGTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTG 917483 Query 76751 TTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATG 76810 || |||||||| || | |||||||| ||||| || | ||||||| ||||||||| ||| Sbjct 917484 TTGCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATG 917543 Query 76811 CCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATA 76870 ||||| || || || || ||||||| || ||| || | | ||| || ||| Sbjct 917544 CCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATG 917603 Query 76871 GATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAG 76930 || || || ||||| || || ||||| ||||||||| || | ||||||||| Sbjct 917604 TGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAG 917663 Query 76931 ATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGA 76990 ||||| || || || ||| ||||| || | |||||| |||||| || ||||| Sbjct 917664 ATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGA 917723 Query 76991 ACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGA 77050 ||| || |||||||||| || || || || || ||||| |||||| || | || Sbjct 917724 GGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGG 917783 Query 77051 TTGTATGTTTCAATAACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCA 77108 ||||| || || || || ||| | || ||| | ||| || || | || ||||||| Sbjct 917784 TTGTACGTCTCGATGAC-GCTGGGA-ATGTCATCGCCATGGATACCAATGGCCACACGCA 917841 Query 77109 TCAACATATGCTGAGGTCGTTCTACAGTCTTAT-TATTTATTTTCAACAAGTATGATTTT 77167 | | ||| ||||| |||| || | | ||| | || || ||||| | ||||| Sbjct 917842 TGACCATGTGCTGGGGTCTCTCGGC-GACTTTTCCATCAATCTTCAAGAGATATGACCGC 917900 Query 77168 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 77214 |||| || || || |||||||||||||| ||||||||||| ||||| Sbjct 917901 TCCAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTA 917947 >seq3 Length=1363476 Score = 168 bits (186), Expect = 1e-36 Identities = 609/929 (66%), Gaps = 24/929 (3%) Strand=Plus/Minus Query 76270 AAGAGCTATAGATGCTAGATTACAAACGGCTA---CCTCATTAGCATTGGCATATTGTAT 76326 ||| || | ||| ||||||| || || ||| ||||||||| || | ||||| | Sbjct 659398 AAGTGCCAAAGAGCCTAGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAAC 659342 Query 76327 TATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTT 76386 || || || ||||| ||||||| || || | |||||| ||||| |||||| Sbjct 659341 GATTTCACAACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTT 659282 Query 76387 GTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAAT 76446 || || | ||| || || || | || || || || ||||| |||| || | | || Sbjct 659281 ATTGCAGGCGTCTTTGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTAT 659222 Query 76447 AGATTTCCAGACGACTCTAG-CTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATAT- 76504 | | ||| | | ||| | |||| | | || | || || ||| | |||||| Sbjct 659221 CGCATGCCACA-GTTTCTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACC 659163 Query 76505 TGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCAT-- 76562 ||| | || | | ||||||||||||| || ||| | |||||| ||| || Sbjct 659162 TGT-TGTAAAGCTTGACAAATTCATCTCCATAAGTGTCACTGAGTCCAGGAGATTGATCC 659104 Query 76563 TCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTA 76622 ||||| | | | ||||||| ||||| || || | |||||| | ||| |||| Sbjct 659103 TCGGAAAAA--AGGCACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTA 659046 Query 76623 TCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC-TGTATTCTTTTTA 76681 |||| |||||| ||||| ||||| | | | |||||| ||||| || || | | | Sbjct 659045 TCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCA 658986 Query 76682 AGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAA-CACC 76740 || || |||||||| | | || | |||||| || |||| ||| || || | || | || Sbjct 658985 AG-TCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACAT-GCAAAAAGCGCC 658928 Query 76741 CGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACAT 76800 |||| |||||| || || ||||| | || | || ||| | ||| | ||| | ||| Sbjct 658927 TGGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCAT 658868 Query 76801 TGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAAT 76860 || | || ||||| ||||||||||| ||||||||||| ||| || || || || Sbjct 658867 AGGCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGAT 658808 Query 76861 ATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAA 76920 || || || ||| ||||| || ||| |||||| || || || | | | | || Sbjct 658807 GTTTGAAACGTGTATGCCAATTCCGCCAGCCGCTTTAGAAATCAGGGCGGA-CTTGTGAA 658749 Query 76921 T-GTGTCATAGATGCCCTCTATACTATCATCCAT-CATGTTAAGAAGAAAACAGCTAGAC 76978 | || | ||||| | |||| || |||| ||| ||||||||||||| || Sbjct 658748 TCGTTCTGAAAATGCCATTTATAGAGTC-CCCATCCATTGCAAGAAGAAAACAGGAGGAT 658690 Query 76979 ATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTT 77038 | | | | | || || || || |||| ||||| || ||||| |||| ||||| Sbjct 658689 AAATTAGGCGTTTCGGTACCGGCGTTGAACAGCGTAGGCGAAGCATGGATGAAGTATTTT 658630 Query 77039 TCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACA 77098 || || | || |||||||||| | ||| ||||||| | || || || || | Sbjct 658629 TCGGACATAAGTCTGTATGTTTCGAGAACGCGGTCTATATTACCTTTGTGTATCCCAATG 658570 Query 77099 GCGACACGCATCAACATATGCTGAGGTCGTTC-TACAGTCTTATTATTTATTTTCAACAA 77157 || || | ||| |||| || |||||| || | ||||| || ||||| | ||| Sbjct 658569 GCCACTCTCATAAACAAATACTGAGGAGTCTCGCAAGGTCTT-CCATCCATTTTTAGCAA 658511 Query 77158 GTATGATTTTTCCAAAGTTTTAAAACCAA 77186 |||||| |||||| ||| | ||||||| Sbjct 658510 ATATGATCTTTCCATTGTTCTGAAACCAA 658482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934337618240