Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq2 179 9e-40
seq1 179 9e-40
seq7 165 2e-35
>seq2
Length=1516309
Score = 179 bits (198), Expect = 9e-40
Identities = 180/233 (77%), Gaps = 3/233 (1%)
Strand=Plus/Minus
Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969
|||| ||||||| | |||||||| || || | || ||||| || |||||| | ||||
Sbjct 177571 AGGTCAAAATGC---AGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGG 177515
Query 177970 TGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCC 178029
| || || ||||||||||| |||||||| ||||| || ||||||||||||||||
Sbjct 177514 TCGAGTCTTCCGACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCC 177455
Query 178030 CTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089
|||| ||||||||| || | ||||||||||| || || ||||| || || || || |||
Sbjct 177454 CTCCTGACCAGCAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTT 177395
Query 178090 CCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
| || || ||| |||||||||| || || ||||| | ||| ||||||| |||
Sbjct 177394 CAGACTACAACATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACTGAGA 177342
>seq1
Length=1541475
Score = 179 bits (198), Expect = 9e-40
Identities = 171/219 (78%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || ||||| || |||||||| ||||| || ||| |||
Sbjct 445287 CAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGAC 445228
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| || |||||||| || ||||||||||| || |||||||||
Sbjct 445227 ACTATCGATAACGTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAGCAA 445168
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || || || || || ||||| ||||| || || ||||| ||||||| ||| |
Sbjct 445167 AGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATT 445108
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || ||||| || || ||| | ||||||||||| |||
Sbjct 445107 CAGAAGGAATCTACTCTTCATTTGGTTTTGAGACTGAGA 445069
Score = 170 bits (188), Expect = 5e-37
Identities = 169/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || ||||| || |||||||| ||||| || ||| |||
Sbjct 445515 CAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGAC 445456
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| || ||||| || || ||||||||||| || |||||||||
Sbjct 445455 ACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAGCAA 445396
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||| ||||| || || || |||||||| || || || | |||| |||||| |
Sbjct 445395 AGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAACATT 445336
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| || || || ||||||| ||||||||| | |||
Sbjct 445335 CAAAAGGAGTCGACCTTGCATCTGGTTTTGAGATTGAGA 445297
Score = 170 bits (188), Expect = 5e-37
Identities = 169/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || ||||| || |||||||| ||||| || ||| |||
Sbjct 445971 CAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGAC 445912
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| || ||||| || || |||||||||||||| |||||||||
Sbjct 445911 ACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAGCAA 445852
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || || || || || ||||| ||||| || || ||||| ||||||| ||| |
Sbjct 445851 AGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATT 445792
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| || || || |||| || ||||||||| | |||
Sbjct 445791 CAAAAGGAGTCGACCTTGCACCTGGTTTTGAGATTGAGA 445753
Score = 152 bits (168), Expect = 1e-31
Identities = 171/228 (75%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | |||||||| || ||| | || || ||||| ||||| | ||||| |||
Sbjct 446205 AAAATGC---AGATTTTCGTTAAGACTTTGACCGGCAAAACTATCACTTTAGAGGTAGAA 446149
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| ||||| ||||| || |||||| |||||||| || || ||||||||||||||
Sbjct 446148 TCTTCTGACACTATCGATAATGTCAAATCGAAGATTCAAGATAAGGAAGGAATCCCTCCT 446089
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||||||| |||| || || || || || ||||| ||||| || || ||||| |||||
Sbjct 446088 GACCAGCAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGAT 446029
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||| | || ||||| || || |||| | || ||||| | |||
Sbjct 446028 TACAACATTCAGAAAGAGTCTACCTTGCACTTGGTCCTGAGATTGAGA 445981
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || ||||| || |||||||| ||||| || ||| |||
Sbjct 445743 CAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGAC 445684
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || ||| || |||||||| ||||| || ||||| || || || ||
Sbjct 445683 ACTATCGATAATGTGAAATCTAAAATTCAGGATAAAGAGGGTATCCCGCCTGATCAACAG 445624
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || || || |||||||| || || ||||| | ||||| ||| |
Sbjct 445623 AGATTGATTTTCGCTGGTAAGCAACTCGAAGACGGCAGAACTCTGTCTGATTACAACATT 445564
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||||| || || |||| || || ||||| | |||
Sbjct 445563 CAGAAAGAGTCTACCTTGCACCTGGTCCTGAGATTGAGA 445525
>seq7
Length=988507
Score = 165 bits (182), Expect = 2e-35
Identities = 168/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || || || ||||||||||||||||| || |||
Sbjct 50300 CAAATCTTCGTCAAGACCCTGACCGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGAC 50241
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || |||||||| || |||||||||
Sbjct 50240 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCTGACCAGCAA 50181
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || ||||| || || |||||||| || || || |||||| | || || ||| ||
Sbjct 50180 AGACTGATTTTCGCTGGTAAGCAGCTCGAGGACGGCAGAACTCTTTCTGACTACAACATC 50121
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || || || || |||| || || | ||||| |||
Sbjct 50120 CAGAAGGAGTCCACTTTGCACCTGGTCCTCAGACTGAGA 50082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203731092040358
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |