Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq7 114 1e-20
seq2 89.7 5e-13
seq1 87.8 2e-12
>seq7
Length=988507
Score = 114 bits (126), Expect = 1e-20
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| |||| ||| ||||||||| ||||| ||||| || || || | |||| |||
Sbjct 50095 ACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCG 50154
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|||||||| || ||||| ||||| | || ||||| | || | | |||||||||| |
Sbjct 50155 AGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATTCCCTCCTTGTCCTGG 50214
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
|| || ||| ||| | | | |||||| ||||||||||| | || || || ||
Sbjct 50215 ATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTT 50273
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| ||||| ||||| ||||| || |||||
Sbjct 50274 ACCGGTCAGGGTCTTGACGAAGATTTGCAT 50303
>seq2
Length=1516309
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/217 (70%), Gaps = 10/217 (5%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|||| ||||| ||| ||| || || ||||| ||||| || ||||| | |||| |||
Sbjct 177355 ACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAAAGGGTTCTGCCGTCCTCG 177414
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|| ||||| |||||||| |||| | || ||||| | || | | || ||||| |
Sbjct 177415 AGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGGATTCCTTCTTTGTCTTGG 177474
Query 41774 ATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828
|| || ||| | | | ||| | |||||| ||||| ||||||| || || |
Sbjct 177475 ATCTTGGACTTGACGTTATCGATG-----GTGTCGGAAGACTCGACCTCCAAGGTGATGG 177529
Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
| || || |||| ||||| |||||||||||||| ||
Sbjct 177530 TCTTTCCGGTCAAGGTCTTGACGAAAATCTGCATTTT 177566
>seq1
Length=1541475
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/215 (70%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
|| |||||||||| || |||||| ||||||||||||||||| | || | ||||
Sbjct 445307 AAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGATAACGTTCTACCGTCT 445366
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
||||| ||||| || ||||| || || | || ||||| | ||| | | ||||| | |
Sbjct 445367 TCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTAT-C 445425
Query 41771 ATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATC 41827
||| |||| | ||| || || | |||||| ||||| ||||| | || ||
Sbjct 445426 TTGAATTTTGGACTTGACATTATCG--ATAGTGTCAGAGGACTCAACCTCAAGGGTGATG 445483
Query 41828 GTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || |||| || || |||||||| |||||
Sbjct 445484 GTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445518
Score = 82.4 bits (90), Expect = 7e-11
Identities = 149/212 (70%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| |||| || ||| ||||||||||| || || || || || | |||| |||
Sbjct 445538 ACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCAGACAGAGTTCTGCCGTCTTCG 445597
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGGA-ACGCTCTCCTTGTCCA 41771
|| ||||| || ||||| |||| | |||||| || |||||| || |||| || |||
Sbjct 445598 AGTTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGCGGGATACCCTCT--TTATCC- 445654
Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830
||| |||| | || || | | |||||| ||||| ||||| | || || ||
Sbjct 445655 TGAATTTTAGATTTCACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTC 445714
Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || |||| || || |||||||| |||||
Sbjct 445715 TTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303959548400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |