Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2119 398 9e-106 >seq2119 Length=607893 Score = 398 bits (440), Expect = 9e-106 Identities = 1383/2140 (65%), Gaps = 41/2140 (2%) Strand=Plus/Minus Query 52801 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 52860 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 506389 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 506330 Query 52861 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATC 52920 || || || |||| || || |||||||| |||| ||| | |||| Sbjct 506329 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 506270 Query 52921 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 52980 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 506269 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 506210 Query 52981 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 53039 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 506209 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 506151 Query 53040 CTGGAAGGTTTG-TA--TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCT 53096 |||| || | || |||||||| || ||| |||| || || || || || Sbjct 506150 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 506091 Query 53097 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 53156 ||||||||| | | | || |||| |||| | | || || || || | || | Sbjct 506090 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGA 506031 Query 53157 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCAT 53216 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 506030 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 505971 Query 53217 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 53276 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 505970 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 505911 Query 53277 TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG-- 53334 | | ||| | | ||||||| || |||| | ||||| | | | | | || Sbjct 505910 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCT 505851 Query 53335 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 53394 | || ||||| | ||| | || |||||| || | || Sbjct 505850 TCTTACCCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGT 505793 Query 53395 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 53454 || |||||||| ||| | || || |||| ||| ||||| || ||| | | |||||| Sbjct 505792 CTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAAT 505733 Query 53455 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT-A 53513 |||||| || || | |||| || || | |||||| | ||||||||| |||| | | Sbjct 505732 GGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCA 505674 Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573 | | || || || ||||| || ||||| ||||||| | | || ||||| | |||| ||| Sbjct 505673 ACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATAT 505614 Query 53574 TAGAGAT---TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGT 53630 | || | | ||| ||| || |||||| || || |||| || |||||||| | || Sbjct 505613 TTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGT 505557 Query 53631 TTCT-GACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATTGT 53680 || | | || ||||| | ||| |||| |||| | || |||| Sbjct 505556 TTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAACAGTTCTTGT 505497 Query 53681 CCATCTATTACAA-ACATGTT--CAATGCAATAGATGCCAGATTACAAACGGCTACCTCA 53737 | ||| || ||| | ||| |||||||| | || | ||||||||| ||| || Sbjct 505496 C-ATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTCC 505438 Query 53738 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 53797 | || | ||||| | || ||| ||| | ||| | | ||||| || ||| Sbjct 505437 TCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAA 505378 Query 53798 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTT 53857 |||||||||||| || |||||||| ||||||||||| | ||||| || ||||||||| Sbjct 505377 TTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTT 505318 Query 53858 TCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTAT 53917 ||| | || | ||||| |||| | ||| | | || || ||| | || | Sbjct 505317 TCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCCT 505258 Query 53918 CTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCC 53977 || ||||||||| ||| ||||| ||| || || || || || | |||| | Sbjct 505257 CTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTC 505198 Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037 || ||||| |||| || | | || | ||| ||| | | | || |||| || | Sbjct 505197 AAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCC 505138 Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097 ||||| | |||||||||||| | ||| |||| |||||| | |||| ||| || || Sbjct 505137 ATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTA 505078 Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157 || || || | | ||| | || | | |||||| |||||||| || || | ||| Sbjct 505077 CCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAA--TAT 505020 Query 54158 ATGGTCATAACTC--CAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 54215 || || ||| | |||| | ||| || || || || || | || || || ||||||| Sbjct 505019 ATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTAT 504960 Query 54216 TATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGC 54275 || | || || | |||||||||||| |||||||||| |||||| || |||| ||||| Sbjct 504959 TAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAG 504900 Query 54276 TTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTA 54335 ||| | | | ||||||| || || || || || || || |||| || || | Sbjct 504899 AACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCA 504840 Query 54336 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 54395 | || ||| ||| || ||||||||||| || || || ||| ||| |||| || || Sbjct 504839 AAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTA 504780 Query 54396 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 54455 ||||| ||||||||| | | ||| |||| ||| || | || |||||||| | Sbjct 504779 AGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCAT 504720 Query 54456 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATT 54515 | || || | | | || | | ||| || || || ||| | || || ||||| Sbjct 504719 GTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCAC 504660 Query 54516 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 54575 |||||| || || || || | ||||| | || || || ||||| | ||||| | Sbjct 504659 CATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCAT 504600 Query 54576 TTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 54635 ||||| | | | || |||| || ||||| |||||||||||||| || |||| Sbjct 504599 TTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGT 504540 Query 54636 CTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGG 54695 ||| || ||| ||| | | | | ||| | || ||| | || | ||| | Sbjct 504539 CTCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAG 504480 Query 54696 TAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAAT 54755 | ||||||| || |||| | |||| ||||||||||||| | ||| || ||| | Sbjct 504479 TCTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTT 504420 Query 54756 CCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 54815 || | |||||| ||| || |||||| || |||| ||||| | || | || Sbjct 504419 GATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTC 504360 Query 54816 TAGCGGCTAGAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGG 54872 |||| || | | |||||||| ||||| | | ||| || || || || |||| | Sbjct 504359 TAGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAG 504303 Query 54873 CTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 54912 | | | | | || ||||| || ||||| || |||| ||| Sbjct 504302 CAGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 504263 Score = 338 bits (374), Expect = 7e-88 Identities = 611/885 (69%), Gaps = 14/885 (2%) Strand=Plus/Minus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| || || | ||||||||||| || |||||||| | | || || || Sbjct 161102 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 161043 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963 ||||| || ||| ||||||| ||||| | || | ||| | |||| ||| || | Sbjct 161042 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACATCCTAATGCAATCAGT 160983 Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 24023 | ||||||||| |||||||| | ||| ||||| || |||||| || | | Sbjct 160982 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 160923 Query 24024 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082 || || || || || |||| ||| | ||||| ||||||| || || || || || || Sbjct 160922 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 160864 Query 24083 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 24142 ||| || ||| ||| || | || |||||| ||| | |||||| || || Sbjct 160863 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 160804 Query 24143 ATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 24202 |||| |||| ||| || ||||||| ||| | |||||||| ||||| | || ||||| Sbjct 160803 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 160744 Query 24203 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC 24262 | || | |||||| | ||| || ||||| |||||||| ||||| |||||||| ||||| Sbjct 160743 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 160684 Query 24263 TACTGCCGCAAAGGCAATAAGTCTTTCTCCATA-ACCGGCGCTGTCATGT---ATCCACT 24318 || || ||||| || | | || ||| || | | || || | || | ||||| | Sbjct 160683 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTT-ATCTGCAATCCATT 160625 Query 24319 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGAT 24378 || ||||| |||||||| | || | ||| || ||||| || || ||||| || | Sbjct 160624 TTAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA 160565 Query 24379 AGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAAT 24438 | | |||| || |||||| | || ||||||||||| | | ||| ||||||||| Sbjct 160564 ATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAAT 160505 Query 24439 GAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 24498 |||||||||| || ||||| || || ||||||||| ||||||| | ||| || || | Sbjct 160504 GAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACAT 160445 Query 24499 CTAT--ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 24556 | | | ||| || || ||||||||||||| ||||| || ||| || ||||| || Sbjct 160444 CACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAA 160387 Query 24557 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATT 24613 ||| | || | || || || |||| | | | | | || |||||||||| Sbjct 160386 CGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATG 160327 Query 24614 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 24673 | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || || Sbjct 160326 CAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTA 160267 Query 24674 CATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718 ||| | ||| || || ||||| | |||||||| | |||||| || Sbjct 160266 CATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 160222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593703179787360