Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq2142 98.7 8e-16
seq2206 93.3 4e-14
>seq2142
Length=155211
Score = 98.7 bits (108), Expect = 8e-16
Identities = 143/202 (71%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|| || |||||||| ||||| ||||| | | ||| | || || | || || ||
Sbjct 147737 GTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCTAATTGCTTACCT 147678
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | |||||||| || ||||| || | |||||||| || ||||||||| ||
Sbjct 147677 GCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTG 147618
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| || ||| | || ||| | |||||||||||| |||||||| ||
Sbjct 147617 ACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTC 147558
Query 21159 TTGACAAATATTTGCATTTTGA 21180
|||||||| |||||||| ||||
Sbjct 147557 TTGACAAAAATTTGCATCTTGA 147536
>seq2206
Length=14499
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037
||| || |||||||||||||| ||||| | || ||| | || || | || || ||
Sbjct 9151 AGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACC 9092
Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097
||| | |||||||| || ||||| || | ||||||||||| ||| || ||
Sbjct 9091 TGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTT 9032
Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157
|| | | ||| ||| ||| | ||| ||| | |||||| ||||| || ||||| ||
Sbjct 9031 GACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGT 8972
Query 21158 TTTGACAAATATTTGCATTTT 21178
||| ||||| |||||||| ||
Sbjct 8971 TTTAACAAAAATTTGCATCTT 8951
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037
||| || |||||||||||||| ||||| | || ||| | || || | || || ||
Sbjct 12113 AGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACC 12054
Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097
||| | |||||||| || ||||| || | ||||||||||| ||| || ||
Sbjct 12053 TGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTT 11994
Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157
|| | | ||| ||| ||| | ||| ||| | |||||| ||||| || ||||| ||
Sbjct 11993 GACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGT 11934
Query 21158 TTTGACAAATATTTGCATTTT 21178
||| ||||| |||||||| ||
Sbjct 11933 TTTAACAAAAATTTGCATCTT 11913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422246426923112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |