Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq2119 315 7e-81
>seq2119
Length=607893
Score = 315 bits (348), Expect = 7e-81
Identities = 603/876 (69%), Gaps = 21/876 (2%)
Strand=Plus/Minus
Query 13928 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13987
||||| ||||| || ||||| |||||||| | || || || || |||||||| || |||
Sbjct 161087 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 161028
Query 13988 GGATTTGTT--GACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAA 14045
|||||||| | | || || |||| ||||| |||| | | | |||| |||||| ||||
Sbjct 161027 GGATTTGTAACGTCGTATAC-CTTT-TCACATCCTAATGCAATCAGTAGTCTATCTGCAA 160970
Query 14046 TGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 14105
||||| | ||| ||| |||| ||||| ||||||||| | | || ||||| |
Sbjct 160969 CAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGG 160910
Query 14106 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTT 14165
| || || ||| ||||| ||| || || ||| | || || | | |||||
Sbjct 160909 CGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTT 160850
Query 14166 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 14225
| || | || || | |||| ||| | ||||| |||||||| ||| | |
Sbjct 160849 TTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 160790
Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285
| |||||||||| ||| || ||||| || || || || ||||||||||| |||| ||||
Sbjct 160789 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 160730
Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345
| ||||| || || | || ||||| || || ||||| || || ||||| |||||||| |
Sbjct 160729 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 160670
Query 14346 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14405
| | || | ||| ||||| | || | ||| | | ||||||||| |||||||| |
Sbjct 160669 CCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGG 160610
Query 14406 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTC-CTTCTCTTTA 14464
|||| || ||| | ||||||||||| ||||| ||||| ||| ||| ||||
Sbjct 160609 CCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTG 160550
Query 14465 GTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATA 14524
| ||| | |||| |||||||| | ||| ||| |||| || || |||||||||||
Sbjct 160549 GATCTTTGA-TGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATC 160491
Query 14525 GCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC---TGAGTAAAAT 14581
|| || || ||||| |||||| |||| |||| ||| || || |||| ||||
Sbjct 160490 ATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAG--AAAT 160433
Query 14582 CTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTT 14641
| || | ||||||||||| |||||||||||| ||| ||||| || || | | ||
Sbjct 160432 -TCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTT 160374
Query 14642 TTAATAAAGTATTGCTCTTCATT---GCTGAGT---TTTTTCCAATCGGCTAAATCCTTA 14695
||| ||| || || |||||| | | | | || |||||||| ||||| ||
Sbjct 160373 GAAATGAAGAAT--CT-TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTG 160317
Query 14696 GAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCAT 14755
|| ||||| | ||| || | ||||| ||| || | || || || |||||| |||
Sbjct 160316 GAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAA 160257
Query 14756 ATTTCTTTATATAATATAGGAAAAACTACAAATCTT 14791
||||| | ||| || ||||| | ||||| |||
Sbjct 160256 ATTTCGTGATACTTGATTGGAAAGAGAACAAACCTT 160221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482330635227760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |