Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq2119 315 7e-81 >seq2119 Length=607893 Score = 315 bits (348), Expect = 7e-81 Identities = 603/876 (69%), Gaps = 21/876 (2%) Strand=Plus/Minus Query 13928 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13987 ||||| ||||| || ||||| |||||||| | || || || || |||||||| || ||| Sbjct 161087 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 161028 Query 13988 GGATTTGTT--GACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAA 14045 |||||||| | | || || |||| ||||| |||| | | | |||| |||||| |||| Sbjct 161027 GGATTTGTAACGTCGTATAC-CTTT-TCACATCCTAATGCAATCAGTAGTCTATCTGCAA 160970 Query 14046 TGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 14105 ||||| | ||| ||| |||| ||||| ||||||||| | | || ||||| | Sbjct 160969 CAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGG 160910 Query 14106 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTT 14165 | || || ||| ||||| ||| || || ||| | || || | | ||||| Sbjct 160909 CGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTT 160850 Query 14166 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 14225 | || | || || | |||| ||| | ||||| |||||||| ||| | | Sbjct 160849 TTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 160790 Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 | |||||||||| ||| || ||||| || || || || ||||||||||| |||| |||| Sbjct 160789 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 160730 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | ||||| || || | || ||||| || || ||||| || || ||||| |||||||| | Sbjct 160729 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 160670 Query 14346 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14405 | | || | ||| ||||| | || | ||| | | ||||||||| |||||||| | Sbjct 160669 CCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGG 160610 Query 14406 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTC-CTTCTCTTTA 14464 |||| || ||| | ||||||||||| ||||| ||||| ||| ||| |||| Sbjct 160609 CCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTG 160550 Query 14465 GTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATA 14524 | ||| | |||| |||||||| | ||| ||| |||| || || ||||||||||| Sbjct 160549 GATCTTTGA-TGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATC 160491 Query 14525 GCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC---TGAGTAAAAT 14581 || || || ||||| |||||| |||| |||| ||| || || |||| |||| Sbjct 160490 ATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAG--AAAT 160433 Query 14582 CTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTT 14641 | || | ||||||||||| |||||||||||| ||| ||||| || || | | || Sbjct 160432 -TCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTT 160374 Query 14642 TTAATAAAGTATTGCTCTTCATT---GCTGAGT---TTTTTCCAATCGGCTAAATCCTTA 14695 ||| ||| || || |||||| | | | | || |||||||| ||||| || Sbjct 160373 GAAATGAAGAAT--CT-TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTG 160317 Query 14696 GAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCAT 14755 || ||||| | ||| || | ||||| ||| || | || || || |||||| ||| Sbjct 160316 GAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAA 160257 Query 14756 ATTTCTTTATATAATATAGGAAAAACTACAAATCTT 14791 ||||| | ||| || ||||| | ||||| ||| Sbjct 160256 ATTTCGTGATACTTGATTGGAAAGAGAACAAACCTT 160221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482330635227760