Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq2119 214 2e-50
seq2142 95.1 1e-14
seq2206 87.8 2e-12
>seq2119
Length=607893
Score = 214 bits (236), Expect = 2e-50
Identities = 609/925 (66%), Gaps = 31/925 (3%)
Strand=Plus/Plus
Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566
|| ||||||||||| | || || | || ||||| | ||||| || | ||||
Sbjct 160192 GAAGAACCACTTTTAAAGGAAAACAAGAGAAGGTTTGTTCTCTTTCCAATCAAGTATCAC 160251
Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626
|| |||||| | |||||||| |||||||||||||| || ||||| | || ||| | ||
Sbjct 160252 GAAATTTGGCAAATGTACAAGAAGGCAGAAGCATCTTTCTGGACTGCGGAGGAAATTGAT 160311
Query 57627 CTGTCTAAGGATCTGAGCGATTGG---GATTCCCTCAAAGAATCTGAGAGAAATTTTATT 57683
|| || || ||| || |||||| || | || ||| ||| ||| || |||
Sbjct 160312 CTCTCCAAAGATTTGCATGATTGGAACAATAGATTGAACGAAAATGAAAGATTCTTCATT 160371
Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743
| || | ||||| || || || || |||||||| || || || ||||| || |
Sbjct 160372 TCAAGAGTTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTCAATGAAAATTTAGTTG-- 160429
Query 57744 AGATTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGG 57801
||| |||| ||| || || ||| | | ||||| | ||| || || || || ||| |
Sbjct 160430 AGAATTTCTCAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTCTATGGGTTCCAAATTA 160489
Query 57802 CCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA-- 57859
|| |||||| | ||||| |||| ||||| || | || ||||| ||| | || ||
Sbjct 160490 TGATGGAAAACATTCATTCGGAAACTTATTCTTTATTGATTGATACTTACATCAAAGATC 160549
Query 57860 CAACGACGAGAAACGTAGAC-TGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGA 57918
||| | || || | | | | ||||| || || |||||||| || ||| | |
Sbjct 160550 CAA--AGGA-AAGTGAATTCTTATTCAATGCAATTGAAACAATCCCATGTATCAAGGAAA 160606
Query 57919 AGGCAGAGTGGTCAATCAAATGGAT-----AAAAAGCGCCACGGCCACGTTCGCCGAGAG 57973
|||| || ||| | | |||||||| | |||| || ||| || |||||
Sbjct 160607 AGGCCGAATGGGCCTTAAAATGGATTGCAGATAAAG-----ATGCGTTGTTTGCAGAGAG 160661
Query 57974 GCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATT 58033
| | | || || || || || |||||||| ||||| || || ||||| | || ||
Sbjct 160662 GTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTT 160721
Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093
||| |||| || | || ||||||| || ||||||| ||||||| |||| | |
Sbjct 160722 CTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAG 160781
Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACC 58153
|| || ||| | ||||| |||||||| || | | | | ||||||| | | |||
Sbjct 160782 AGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCT--TTTCACATTTGAACCATACC 160839
Query 58154 GACGCGGGATCGCATCTTGGAC--ATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTT 58211
| | | | | ||| || || ||||| || || | || ||||| | |
Sbjct 160840 CCAGACGAAAAAATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAAAAGAAATAC 160899
Query 58212 GTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTAC 58271
|||| || |||||||| || | ||||||||||||| || |||||||||| ||||
Sbjct 160900 TTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTAT 160959
Query 58272 ATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACA 58329
| ||||||||||| || ||||| || | | | | ||| || | || ||| ||
Sbjct 160960 GTCGAGTTTGTTGCAGATAGACTACTGATTGCATTAGGATGTGAAAAGGT--ATACGACG 161017
Query 58330 CGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCG 58389
| |||||| || || |||||| | || || || | || || |||||||||||||
Sbjct 161018 TTACAAATCCATTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAAACAAACTTTTTCG 161077
Query 58390 aaaaaaaaGTTAGCGAATATCAAAA 58414
|||| | ||| ||| || |||||
Sbjct 161078 AAAAGAGAGTCTCCGACTACCAAAA 161102
Score = 136 bits (150), Expect = 4e-27
Identities = 402/620 (65%), Gaps = 0/620 (0%)
Strand=Plus/Minus
Query 23339 TTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCG 23398
|| ||||| | | |||||| | ||| || ||||||| ||| ||| | || | ||
Sbjct 505152 TTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCT 505093
Query 23399 CGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGC 23458
| | || ||||| ||| ||| || | | ||| | ||| || | | || | ||||
Sbjct 505092 CTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGC 505033
Query 23459 CACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAA 23518
|| ||||| | || | |||||||| || ||||| ||||| || || || || || ||
Sbjct 505032 CAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATAC 504973
Query 23519 CGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACG 23578
| || ||||| || | || || | ||| || | | || ||||| | ||
Sbjct 504972 CTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTA 504913
Query 23579 CCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCC 23638
|| || | | ||||| ||| || || || || | || || || || || || |
Sbjct 504912 CCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCA 504853
Query 23639 GATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCT 23698
| ||| || |||| || |||| ||||| ||| || ||||| || || ||| || ||
Sbjct 504852 GTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCC 504793
Query 23699 TTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGT 23758
|| | || || |||||||| ||||||||||| | | || ||| | | ||| ||
Sbjct 504792 TTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGA 504733
Query 23759 GTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCA 23818
|| || || || || || || | || ||||| | ||| || || || || | | |
Sbjct 504732 GTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAA 504673
Query 23819 TCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG 23878
||||| || || || || ||||| | ||| || | ||| || | | ||| || || |||
Sbjct 504672 TCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCG 504613
Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938
| | || || ||| | || ||||| | || | ||||| || |||||||||
Sbjct 504612 GCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAG 504553
Query 23939 TCATAGTTAAAGTCACGATC 23958
| ||| || ||||| | |||
Sbjct 504552 TTATAATTGAAGTCTCTATC 504533
>seq2142
Length=155211
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||||||||| || ||||| | || || || || || ||| | || |||||| |
Sbjct 147538 AAGATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCT 147597
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| |||| | ||||| || | || || |||||||| | || || |||
Sbjct 147598 TCTGACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGAC 147657
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | || || || || || || || || ||||| || ||| | ||| ||
Sbjct 147658 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTAC 147717
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| ||||| ||||| || ||||| |||| | ||| |||| || ||||
Sbjct 147718 AACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGTA 147769
>seq2206
Length=14499
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||||||||| || || ||| | || || || || || ||| | || || || |
Sbjct 8951 AAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCA 9010
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | |||| | ||||| | ||| ||||||||||| | || || |||
Sbjct 9011 TCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 9070
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | || || || || || || || || ||||| || ||| || || ||
Sbjct 9071 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTAC 9130
Query 31370 AACATTCAAAAAGAATCGACTCTTCA 31395
||||||||||| ||||| ||||||||
Sbjct 9131 AACATTCAAAAGGAATCTACTCTTCA 9156
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||||||||| || || ||| | || || || || || ||| | || || || |
Sbjct 11913 AAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCA 11972
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | |||| | ||||| | ||| ||||||||||| | || || |||
Sbjct 11973 TCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 12032
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | || || || || || || || || ||||| || ||| || || ||
Sbjct 12033 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTAC 12092
Query 31370 AACATTCAAAAAGAATCGACTCTTCA 31395
||||||||||| ||||| ||||||||
Sbjct 12093 AACATTCAAAAGGAATCTACTCTTCA 12118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445752570097440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |