Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2119 176 9e-39 >seq2119 Length=607893 Score = 176 bits (194), Expect = 9e-39 Identities = 308/442 (70%), Gaps = 11/442 (2%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || || |||||||| |||||||| || ||||| |||| |||| |||||||| |||||| Sbjct 160666 GTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGG 160725 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | || || || ||| | |||| ||| | || | |||||| ||| | |||| ||| || Sbjct 160726 TTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGAT 160785 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 |||||| | ||| ||| ||||| || |||| || | | ||| |||||||| Sbjct 160786 GAAGGTTTACATACCGATTTTGCTTGTTTGCTCTTTTCACA---TTTGAACCATACCCCA 160842 Query 102098 TCAAGAGAAAGGATTCTTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154 | || ||| ||| | |||| | || |||||||| |||||| ||||| | Sbjct 160843 G-ACGAAAAA--ATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAA-AAGAAATA 160898 Query 102155 CT-CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213 || ||| | |||| ||||| || || | || ||||| | |||||| | ||||| Sbjct 160899 CTTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTA 160958 Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGT 102273 | || ||||| ||||||| |||| || ||| | | ||| |||||| || | || Sbjct 160959 TGTCGAGTTTGTTGCAGATAGACTACTGATTGCATTAGGATGTGAAAAGGTATACGACGT 161018 Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333 ||| || || ||| || ||||| || |||||||| | ||| || |||||||| || Sbjct 161019 TACAAATCCATTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAAACAAACTTTTTCGA 161078 Query 102334 AAAGAGAGTCGCCGAGTATCAA 102355 |||||||||| |||| || ||| Sbjct 161079 AAAGAGAGTCTCCGACTACCAA 161100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989552530610310