Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq2119 459 3e-124 >seq2119 Length=607893 Score = 459 bits (508), Expect = 3e-124 Identities = 1444/2217 (65%), Gaps = 38/2217 (2%) Strand=Plus/Minus Query 62039 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 62098 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 506389 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 506330 Query 62099 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 62158 || || || |||| || || |||||||| ||||| ||| | |||| Sbjct 506329 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 506270 Query 62159 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62218 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 506269 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 506210 Query 62219 TTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62277 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 506209 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 506151 Query 62278 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCT 62334 |||| || | || |||||||| || ||| |||| || || || || || Sbjct 506150 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 506091 Query 62335 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGA 62394 ||||||||| | | | || |||| |||| | | || ||||| || | |||| Sbjct 506090 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGA 506031 Query 62395 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCAT 62454 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 506030 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 505971 Query 62455 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 62514 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 505970 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 505911 Query 62515 TAAGACCGTATGTTCTGATTTTATCTTTTAGATGT-TCCCAATTCCAAAGATCCGACGGT 62573 | | ||| | | ||||||| || |||| ||| ||||| | | | | | || Sbjct 505910 TCAAACCATTGGCCTTGATTTTCTCCTTTA-ATGAATCCCAGTCATATAAGTTGGTTGGC 505852 Query 62574 ACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTA 62633 | | | ||||| | ||| | || |||||| || | || Sbjct 505851 TTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGTC 505792 Query 62634 TCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATG 62693 ||||||||||| ||| | || || || | ||| ||||| || ||| | | ||||||| Sbjct 505791 TCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAATG 505732 Query 62694 GTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTT-AA 62752 |||||||| || | |||| || || | |||||| || ||||||||| |||| | || Sbjct 505731 GTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCAA 505673 Query 62753 GAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62812 | || || || || || || ||||| ||||||| | | || ||||| | |||| |||| Sbjct 505672 CATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATATT 505613 Query 62813 AGAGAT---TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62869 || | | ||| ||| || |||||| || || |||| || |||||||| | || Sbjct 505612 TGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGTT 505556 Query 62870 TCT-GACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATCGCC 62919 | | | || ||||| | ||| |||| |||| | || || || Sbjct 505555 TTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAA--CAGTTCTTG 505498 Query 62920 -CATCTATTACAA-ACATGTT--CAATGCAACAGATGCCAGATTACACACGGCTACCTCA 62975 |||| || ||| | ||| |||||||||| || | |||||| || ||| || Sbjct 505497 TCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTCC 505438 Query 62976 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAA 63035 | || | ||||| | || ||| ||| | ||| | | |||||| || ||| Sbjct 505437 TCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAA 505378 Query 63036 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 63095 |||||||||||| || |||||||| ||||||||||| | ||||| || ||||||||| Sbjct 505377 TTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTT 505318 Query 63096 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTAT 63155 ||| | |||| ||||| |||| | ||| | | | || || ||| | || | Sbjct 505317 TCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCCT 505258 Query 63156 CTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCC 63215 || | ||||||||| ||| ||||| ||| || ||| || || || | |||| | Sbjct 505257 CTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTC 505198 Query 63216 AATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63275 || | ||| |||| || | | || | ||| ||| | | | || |||| || | Sbjct 505197 AAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCC 505138 Query 63276 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTT 63335 ||||| | |||||||||||| | ||| |||| |||||||| |||| ||| || || Sbjct 505137 ATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTA 505078 Query 63336 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63395 || || || | | ||| | || | | |||||| |||||||| || || | ||| Sbjct 505077 CCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATAT 505018 Query 63396 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63455 | || | | ||||| | ||| || || || || || | || || || ||||||||| Sbjct 505017 AGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATTA 504958 Query 63456 TAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCT 63515 | || || | |||||||||||| || || ||| ||||||| ||||||| ||||| Sbjct 504957 AAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAA 504898 Query 63516 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63575 ||| | | | ||||||| || || || || || || || |||| || || || Sbjct 504897 CCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAA 504838 Query 63576 GCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGA 63635 || ||| ||| || || |||||||| ||||| ||| ||| || |||| || || Sbjct 504837 GCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAG 504778 Query 63636 AAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 63695 ||||| ||||||||| | | | ||| |||| ||| || | || |||||||| || Sbjct 504777 AAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGT 504718 Query 63696 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGA 63755 || || | | | || | | ||| || || |||||| | || || ||||| | Sbjct 504717 GTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACCA 504658 Query 63756 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTT 63815 ||||| || || || || | ||||| | || || || ||||| |||| || ||| Sbjct 504657 TGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATTT 504598 Query 63816 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63875 ||| | || | || |||| || ||||| |||||||||||||| || |||||| Sbjct 504597 ATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTCT 504538 Query 63876 CGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTA 63935 | || ||| ||| | || | ||| | || ||| | || || ||| || Sbjct 504537 CTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGTC 504478 Query 63936 ATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCC 63995 ||||||| || |||| | |||| ||||||||||||| || ||| | ||| | Sbjct 504477 TCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTGA 504418 Query 63996 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTG 64055 | | |||||| ||| || |||||| ||| |||| ||||| || || | ||| Sbjct 504417 TTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCTA 504358 Query 64056 GCGGCTAGAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGCT 64112 || || | | |||||||| ||||| | | ||| || || || || |||| || Sbjct 504357 GCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGCA 504301 Query 64113 GCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATA 64172 || | | | || ||||| || ||||| || |||| ||| | || ||||| |||| | Sbjct 504300 GCTAAATTATCTAATTCGACAGTTGTAACACCATCATAAACACCAGAAATAATCTTCTGA 504241 Query 64173 GCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTT-TCTAAT 64228 | ||| | ||||| | || | || ||| ||||| |||||| |||||| Sbjct 504240 GTAATTGCAGAAGGATGCACGTGTCTTGAGTCTAAACCATATGCCAATTTCTCTAAT 504184 Score = 311 bits (344), Expect = 1e-79 Identities = 605/885 (68%), Gaps = 14/885 (2%) Strand=Plus/Minus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| || || | ||||||||||| || ||||| || | | || || || Sbjct 161102 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 161043 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 ||||| || || || ||||| ||||| | ||| | |||| | |||| ||| || | Sbjct 161042 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACATCCTAATGCAATCAGT 160983 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 | ||||||||| || || || | ||| ||||| || |||||| || | | Sbjct 160982 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 160923 Query 33471 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529 || || || || || |||| ||| | ||||| |||||| || || | || || || Sbjct 160922 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 160864 Query 33530 AAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAA 33589 ||| || ||| ||| || | ||| |||||| ||| | |||||| || || Sbjct 160863 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 160804 Query 33590 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCAT 33649 |||| || | ||| || ||||||| ||| | ||||| || ||||| | || ||||| Sbjct 160803 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 160744 Query 33650 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTC 33709 | || | |||||| | ||| || ||||| || ||||| || || ||||| || ||||| Sbjct 160743 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 160684 Query 33710 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGCTGTCATGT---ATCCACT 33765 || |||||||| || | | |||||| || | | || || | || | ||||| | Sbjct 160683 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTT-ATCTGCAATCCATT 160625 Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825 || ||||| |||||||| | || | ||| || || ||||| || ||||| || | Sbjct 160624 TTAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA 160565 Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33885 | | |||| || |||||| | |||||||| ||||| | | ||| ||||||||| Sbjct 160564 ATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAAT 160505 Query 33886 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 33945 |||||||||| || || || || || ||||||||| ||||||| | ||| || || | Sbjct 160504 GAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACAT 160445 Query 33946 CTGT--ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAA 34003 | | | ||| || || ||||||||||||| ||||| |||||| || ||||| || Sbjct 160444 CACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAA 160387 Query 34004 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATT 34060 ||| | || | || || || |||| | | | | | || |||||||||| Sbjct 160386 CGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATG 160327 Query 34061 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 34120 | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || || Sbjct 160326 CAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTA 160267 Query 34121 CATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165 ||| | ||| || || ||||| | |||||| || | |||||| || Sbjct 160266 CATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 160222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629798059908960