Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2119 158 9e-34 >seq2119 Length=607893 Score = 158 bits (174), Expect = 9e-34 Identities = 294/424 (69%), Gaps = 22/424 (5%) Strand=Plus/Plus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||| ||||| ||||||||||| | | || ||||| |||||||| |||| |||||| Sbjct 160667 TGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGT 160726 Query 22808 TG---AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTG 22864 || |||| | ||| | |||||||| ||| |||| ||||||||| ||||| | | | Sbjct 160727 TGAAAAAGAGAGGTT---TGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAG 160783 Query 22865 ACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGT 22924 | |||||| |||| || ||||||||| |||| ||| || || || || ||| Sbjct 160784 ATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCTTT--TCACATTTGAACCATACC-- 160839 Query 22925 GTCAGGACGA------TG-CACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCT 22977 | ||||| || || | |||||||| | || |||||||| ||||| | | Sbjct 160840 --CCAGACGAAAAAATTGTCAGA-CAAATCATTACCGAAGCCGTTGATATTGAAAAGAAA 160896 Query 22978 TTCTTCCAAGAGGCACTA-AAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACT 23036 | |||| || || ||| | || | | || |||||||||| || ||| | | Sbjct 160897 TACTTCACTGACGCCCTACCTGTCA-ACTTGCTCGGTATGAATAAGGATTTGATGTGTCA 160955 Query 23037 GTACATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAA 23096 ||| | |||||||||||||| | || || ||| | || | || |||| | || | Sbjct 160956 GTATGTCGAGTTTGTTGCAGATAGACTACTGATTGCATTAGGATGTGAAAAGGTATACGA 161015 Query 23097 CGTTGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTT 23156 |||| | |||||||| || || ||||| |||||| | ||| |||||||||||||| || Sbjct 161016 CGTTACAAATCCATTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAAACAAACTTTTT 161075 Query 23157 TGAA 23160 ||| Sbjct 161076 CGAA 161079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356222824156246