Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2119 484 1e-131 >seq2119 Length=607893 Score = 484 bits (536), Expect = 1e-131 Identities = 1400/2139 (65%), Gaps = 39/2139 (2%) Strand=Plus/Minus Query 78711 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 78770 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 506389 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 506330 Query 78771 TTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 78830 || || || |||| || ||||||||||| ||||| ||| | |||| Sbjct 506329 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 506270 Query 78831 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 78890 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 506269 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 506210 Query 78891 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 78949 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 506209 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 506151 Query 78950 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 79006 |||| || | || |||||||| || ||| ||||| || || || || || Sbjct 506150 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 506091 Query 79007 CTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 79066 |||||||| | | | || |||| |||| | | || || || || | || | Sbjct 506090 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGA 506031 Query 79067 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCAT 79126 |||| || | || ||||| | || ||||||||| || || ||||| | |||| | Sbjct 506030 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 505971 Query 79127 TATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTC 79186 | | || | |||||||| ||||| || || ||||| ||||| || | || ||||| Sbjct 505970 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 505911 Query 79187 TAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGG-- 79244 | | ||| | | ||||||| || |||| || ||||| || | || || || Sbjct 505910 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTC----ATATAAGTTGGTT 505855 Query 79245 GACAACATTCC--AAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302 | | | | || |||||||| | ||||| | ||| | || |||||| | Sbjct 505854 GGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAA 505795 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 || ||||| ||||| ||| | | ||||||| ||| ||||| || || | | |||| Sbjct 505794 GTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAAGCAGCATGATAA 505735 Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422 |||||||| ||||| | |||| || || | ||||||| | ||||||||| |||| | Sbjct 505734 ATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCT 505676 Query 79423 -AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 79481 || | || || || ||||| || ||||| ||||||| | | || ||||| | |||| | Sbjct 505675 CAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCAT 505616 Query 79482 ATTAGAAAT---TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 79538 ||| || | | ||| ||| || |||||| || || |||| || |||||||| | Sbjct 505615 ATTTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAA 505559 Query 79539 ATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC------- 79591 || | | || || | || | || || ||| | | | | | Sbjct 505558 GTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAACAGTTCTT 505499 Query 79592 --CATCTATTACAA-ACATGTT--CAACGCGACAGATGCCAGATTACAAACGGCTACCTC 79646 |||| || ||| | ||| ||| || ||| || | ||||||||| ||| || Sbjct 505498 GTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTC 505439 Query 79647 ATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAA 79706 | || | ||||| | |||||| ||| | || | | || || || || Sbjct 505438 CTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAA 505379 Query 79707 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGT 79766 ||||||||||||| || |||||||| ||||||||||| | ||||| || |||||||| Sbjct 505378 ATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGT 505319 Query 79767 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTA 79826 |||| | |||| ||||| |||| | ||| | | | || || ||| | | || Sbjct 505318 TTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCC 505259 Query 79827 TCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTC 79886 ||| ||||||||| |||| ||||||||| || ||| || || || | ||||| Sbjct 505258 TCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACT 505199 Query 79887 TAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTT 79946 || ||||| ||| ||| | | || | ||| ||| ||| | || |||| || Sbjct 505198 CAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTC 505139 Query 79947 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 80006 |||||| | |||||||||||| | ||| |||| |||||| | |||| || || || Sbjct 505138 CATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTT 505079 Query 80007 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 80066 || || || | | ||| | || | | |||||| |||||||| || || | || Sbjct 505078 ACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATA 505019 Query 80067 TATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 80126 || || | | || |||| ||| || || || || || | || || || |||||||| Sbjct 505018 TAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATT 504959 Query 80127 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCT 80186 | | || || | |||||||||||| ||||||||||||||||| || |||| ||||| Sbjct 504958 AAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGA 504899 Query 80187 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 80246 ||| | | | ||||||| || || || || || || || |||| || || || Sbjct 504898 ACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAA 504839 Query 80247 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAG 80306 || ||| ||| || ||||||||||| || || ||| ||| || |||| || || Sbjct 504838 AGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAA 504779 Query 80307 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 80366 ||||| ||||||||| | | ||| |||| ||| || | || |||||||| || Sbjct 504778 GAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATG 504719 Query 80367 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 80426 || || | | | |||| | ||| || || |||||| | || || ||||| Sbjct 504718 TGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACC 504659 Query 80427 ATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATT 80486 |||||| || || || || | ||||| | || || || ||||| | ||||| ||| Sbjct 504658 ATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATT 504599 Query 80487 TATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 80546 |||| | || | ||| |||| || ||||| |||||||||||||| || ||||| Sbjct 504598 TATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTC 504539 Query 80547 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 80606 || || ||| ||| | | | | ||| | || ||| | || | ||| || Sbjct 504538 TCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGT 504479 Query 80607 GATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 80666 ||||||| || |||| | |||| ||||||||||||| || ||| | ||| | Sbjct 504478 CTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTG 504419 Query 80667 CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCT 80726 | | |||||| ||| || |||||| ||| |||| ||||| | || | ||| Sbjct 504418 ATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCT 504359 Query 80727 GGCGGCTAAAATGGCATAATCTGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGC 80783 || || || | |||||||||||||| | | ||| || || || || |||| || Sbjct 504358 AGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGC 504302 Query 80784 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 80822 || | | | || ||||| || ||||| || |||| ||| Sbjct 504301 AGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 504263 Score = 322 bits (356), Expect = 7e-83 Identities = 608/887 (69%), Gaps = 18/887 (2%) Strand=Plus/Minus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| || || | ||||||||||| || ||||| || | | || || || Sbjct 161102 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 161043 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 ||||| || || || ||||| ||||| | || | |||| | |||| ||| || | Sbjct 161042 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACATCCTAATGCAATCAGT 160983 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 | |||||| || ||||| || | ||| ||||| || |||||| || | | Sbjct 160982 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 160923 Query 49849 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 49907 || || || || || |||| ||| | ||||| |||||| || || || || || || Sbjct 160922 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 160864 Query 49908 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 49967 ||| || ||| ||| || | ||| |||||| ||| | |||||| || || Sbjct 160863 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 160804 Query 49968 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 50027 |||| || | ||| || ||||||| ||| || |||||||| ||||| | || ||||| Sbjct 160803 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 160744 Query 50028 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTC 50087 | || | |||||| | ||| || ||||| |||||||| ||||| ||||| || ||||| Sbjct 160743 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 160684 Query 50088 TACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGT---ATCCACTT 50144 || || ||||| || || | |||||| || | || | || | ||||| || Sbjct 160683 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTT 160624 Query 50145 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 50204 | ||||| |||||||| | || | ||| || || ||||| || ||||| || | | Sbjct 160623 TAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAA 160564 Query 50205 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 50264 | |||| || |||||| | |||||||| ||||| | | ||| |||||||||| Sbjct 160563 TTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATG 160504 Query 50265 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 50324 ||||||||| || || || || || ||||||||| ||||||| | ||| || || || Sbjct 160503 AATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATC 160444 Query 50325 TGT--ACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 50382 | | ||| || ||| ||||||||||||| ||||| || ||| || ||||| ||| Sbjct 160443 ACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAAC 160386 Query 50383 GC--CAATACATGTTTTATAAAATGT----TTTTCGTTGGGTGTTAGTTTATTCCAATCA 50436 || || | || | | ||| | |||||||| | | || ||||||||| Sbjct 160385 GCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCT---ATTGTTCCAATCA 160329 Query 50437 TTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 50496 | | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || Sbjct 160328 TGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTG 160269 Query 50497 TACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543 ||||| | ||| || || ||||| | |||||| || | |||||| || Sbjct 160268 TACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 160222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718246515710480