Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq2119 309 3e-79
>seq2119
Length=607893
Score = 309 bits (342), Expect = 3e-79
Identities = 600/873 (69%), Gaps = 17/873 (2%)
Strand=Plus/Minus
Query 13596 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13655
||||| ||||| || ||||| |||||||| | || || || || |||||||| || |||
Sbjct 161087 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 161028
Query 13656 GGATTTATT--GACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAA 13713
|||||| | | | || || |||| ||||| |||| | | | |||| |||||| ||||
Sbjct 161027 GGATTTGTAACGTCGTATAC-CTTT-TCACATCCTAATGCAATCAGTAGTCTATCTGCAA 160970
Query 13714 TAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 13773
|||||| | ||| ||| |||| ||||| ||||||||| | | || ||||| |
Sbjct 160969 CAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGG 160910
Query 13774 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCT 13833
| || || ||| ||||| ||| || || || | || || | | | ||| |
Sbjct 160909 CGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTT 160850
Query 13834 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 13893
| || | || || | |||| ||| | ||||| |||||||| ||| | |
Sbjct 160849 TTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 160790
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
| |||||||||| ||| || ||||| || || || || ||||||||||| |||| ||||
Sbjct 160789 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 160730
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| ||||| || || | |||||||| || || ||||| || || ||||| |||||||| |
Sbjct 160729 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 160670
Query 14014 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14073
| | || | ||| ||||| | || | ||| | | ||||||||| |||||||| |
Sbjct 160669 CCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGG 160610
Query 14074 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTC-CTTCTCTTTA 14132
|||| || ||| | ||||||||||| ||||| ||||| |||| ||| ||||
Sbjct 160609 CCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTG 160550
Query 14133 GTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATA 14192
| ||| | |||| |||||||| | ||| ||| |||| || || |||||||||||
Sbjct 160549 GATCTTTGA-TGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATC 160491
Query 14193 GCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTC-CGAGTAAAATCT 14251
|| || || ||||| || ||| |||| || | ||| || || | | |||| |
Sbjct 160490 ATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAAT-T 160432
Query 14252 TTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTT 14311
|| | ||||||||||| |||||||||||| ||| ||||| || || | | ||
Sbjct 160431 CTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGA 160372
Query 14312 AATAAAGTATTGCTCTTCATT---GTTGAGT---TTTTTCCAATCGGATAAATCCTTAGA 14365
||| ||| || || |||||| ||| | | || |||||||| ||||| || ||
Sbjct 160371 AATGAAGAAT--CT-TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGA 160315
Query 14366 AAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14425
||||| | ||| || | ||||| ||| || | || || || |||||| ||| ||
Sbjct 160314 GAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAAAT 160255
Query 14426 TTCTTTATATAATATAGGAAAAACTACAAATCT 14458
||| | ||| || ||||| | ||||| ||
Sbjct 160254 TTCGTGATACTTGATTGGAAAGAGAACAAACCT 160222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479713116438800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |