Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq2119 316 2e-81 >seq2119 Length=607893 Score = 316 bits (350), Expect = 2e-81 Identities = 602/874 (69%), Gaps = 17/874 (2%) Strand=Plus/Minus Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443 ||||| ||||| |||||||| |||||||| | || || || || |||||||| |||||| Sbjct 161087 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 161028 Query 13444 GGATTTGTT--GACATAAACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAA 13501 |||||||| | | || || |||| ||||| |||| | | | | || |||||| |||| Sbjct 161027 GGATTTGTAACGTCGTATAC-CTTT-TCACATCCTAATGCAATCAGTAGTCTATCTGCAA 160970 Query 13502 TAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 13561 |||||| | ||| ||| |||| ||||| ||||||||| | | || ||||| | Sbjct 160969 CAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGG 160910 Query 13562 TATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGT 13621 | ||| || ||| ||||| ||| || || ||| | || || | | ||| | Sbjct 160909 CGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTT 160850 Query 13622 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 13681 | || | || || | |||| ||| | ||||| |||||||| ||| | | Sbjct 160849 TTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 160790 Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 | |||||||||| ||| || ||||| || || || || ||||||||||| |||| |||| Sbjct 160789 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 160730 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | ||||| || || | || ||||| || || ||||| || || ||||| |||||||| | Sbjct 160729 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 160670 Query 13802 CTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAG 13861 | | | | ||| ||||| | || | ||| | || ||||||||| |||||||| | Sbjct 160669 CCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGG 160610 Query 13862 AtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTC-CTTCTCTTTA 13920 |||| || ||| | |||||||| |||||||||||||| ||| ||| |||| Sbjct 160609 CCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTG 160550 Query 13921 GTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATA 13980 | ||| ||||| |||||||| | ||| ||| |||| || || |||||||| || Sbjct 160549 GATCTT-TGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATC 160491 Query 13981 GCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC-CGAGTAAAATCT 14039 || || || ||||| |||||| |||| |||| ||| || || | | |||| | Sbjct 160490 ATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAAT-T 160432 Query 14040 TTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTT 14099 || | || |||||||| || ||||||||| ||| ||||| || || | | || Sbjct 160431 CTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGA 160372 Query 14100 AATAAAGTATTGCTCTTCATT---GTTGAGT---TTTTTCCAATCGGCTAAATCCTTAGA 14153 ||| ||| || || |||||| ||| | | || |||||||| ||||| || || Sbjct 160371 AATGAAGAAT--CT-TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGA 160315 Query 14154 AAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14213 ||||| | ||| || | ||||| ||| || | || || || |||||| ||| || Sbjct 160314 GAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAAAT 160255 Query 14214 TTCTTTATATAATATAGGAAAAACTACAAATCTT 14247 ||| | ||| || ||||| | ||||| ||| Sbjct 160254 TTCGTGATACTTGATTGGAAAGAGAACAAACCTT 160221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478573951782480