Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq2119 416 4e-111 >seq2119 Length=607893 Score = 416 bits (460), Expect = 4e-111 Identities = 1358/2098 (65%), Gaps = 43/2098 (2%) Strand=Plus/Minus Query 70837 AGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGT 70896 || || ||||| ||||| || || || |||| || || |||||||| ||||| | Sbjct 506346 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 506287 Query 70897 TTGGA-ATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGC 70955 || || | | |||| | || || ||||| || || ||||| | | | || Sbjct 506286 TTACCCATTGTT-GGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGC 506228 Query 70956 TCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA 71015 || || || |||||||| | || || |||||||| | || ||||| | ||| ||||| Sbjct 506227 ACCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATA 506168 Query 71016 -AACTCGCTTAATATCTTCTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCAA 71071 || || ||| || |||| |||| || | || |||||||| || ||| ||||| | Sbjct 506167 TAAGTC-CTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGA 506109 Query 71072 TAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGAT 71131 | || ||||| || |||||||| | | | || |||| |||| | | || Sbjct 506108 TGATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATAT 506049 Query 71132 GAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTAT 71191 ||| || || | || ||||| || | || ||||| | || ||||||||| || | Sbjct 506048 AAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGT 505989 Query 71192 ACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTG 71251 | ||||| | | || || | || | |||||||| ||||| ||||||||||| |||| Sbjct 505988 AAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTG 505929 Query 71252 CCAC---CAATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCC 71308 | || |||| || |||||| | ||||| | |||||| || |||| || |||| Sbjct 505928 CAACAAGCAAT-GA--ATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 505872 Query 71309 AATTCCAAAGATCCGATGG--TACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACT 71366 | | | | | | ||| | || | || | Sbjct 505871 AGTCATATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGA--CCTTGGGA 505814 Query 71367 AGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGC 71426 || |||||| || | || || |||||||| || | | || |||| ||| || Sbjct 505813 TGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGC 505754 Query 71427 CTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGG 71486 ||| || || ||| |||||||||||| ||||| | |||| || || | |||||| || Sbjct 505753 CTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGG 505694 Query 71487 GCTATCAAATGGATAATTT-AAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATAC 71545 ||||||||| |||| | || | || || || ||||| || ||||| || |||| | Sbjct 505693 CGAATCAAATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAG 505635 Query 71546 CGATAGGTCTGTGTCTCTTATTAGAAAT---TTCAGCTTCTGGAATAGGATAATAATTAA 71602 | || ||||||| |||| |||| || | | ||| ||| || |||||| || || Sbjct 505634 CAATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTC 505578 Query 71603 TATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAA 71662 |||| || |||||||| | ||| | | || || | || | || || || Sbjct 505577 TATCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAA 505518 Query 71663 AATCAAATCTCC---------CATCTATT---ACAAACACGTTCAAGGCAACAGATGCCA 71710 | | | | | | |||| || ||||| | ||| |||||| || | Sbjct 505517 AGTTATACCAACAGTTCTTGTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTA 505458 Query 71711 GATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTAC 71770 ||||||||| ||| || | || | ||||| | ||||||| ||| | ||| Sbjct 505457 AATTACAAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGG 505398 Query 71771 TACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 71830 | | ||||| || ||||||||||||||| || |||||||| ||||||||||| | Sbjct 505397 AAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATA 505338 Query 71831 GAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAG 71890 || || || |||||||||||| | |||| ||||| |||| | ||| | | | | Sbjct 505337 ACATGAAAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTG 505278 Query 71891 CCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACT 71950 | || ||| | || || ||| ||||||||| |||| ||||||||| || ||| | Sbjct 505277 CTTTAATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATT 505218 Query 71951 CGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTC 72010 | || || | ||| || ||||| |||| | || | | || | ||| ||| Sbjct 505217 CATCACCATATACATCACTCAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTT 505158 Query 72011 CATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 72070 ||| | | |||| || |||||| | |||||||||||| | ||| |||| ||||| Sbjct 505157 CATTTTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTC 505098 Query 72071 TGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 72130 | | |||| || || || || || || | | ||| | || | | |||||| | Sbjct 505097 TTGCTCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTG 505038 Query 72131 AATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTA 72190 ||||||| || || | |||| || | | || || | ||| || || || || || | Sbjct 505037 AATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAA 504978 Query 72191 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCAT 72250 || || || ||||||||| | || || | |||||||||||| |||||||||| ||||| Sbjct 504977 CATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCAT 504918 Query 72251 TGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCC 72310 | || |||| ||||| ||| | | | |||||| || || || || || | Sbjct 504917 TAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATACCAC 504858 Query 72311 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 72370 | || |||| || || || || ||| ||| || ||||||||||| || || || || Sbjct 504857 CAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAAT 504798 Query 72371 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 72430 | ||| |||| || || ||||| ||||||||| | | ||| |||| ||| | Sbjct 504797 CGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGA 504738 Query 72431 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAG 72490 | | || |||||||| || || || | | | |||| | ||| || || |||||| Sbjct 504737 AAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAA 504678 Query 72491 CTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTC 72550 | || || ||||| ||| || || || || || | ||||| | ||| || || | Sbjct 504677 CAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCC 504618 Query 72551 TTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 72610 |||| | ||||| ||||||| | || | || |||| || ||||| ||||||| Sbjct 504617 TTTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAA 504558 Query 72611 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATT 72670 ||||||| || ||||||| || ||| ||| | || | | ||| | || || Sbjct 504557 AATAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATTCGCATTTT 504498 Query 72671 TGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGAT 72730 | | || || ||| || ||||||| || |||| | |||| ||||||||||||| Sbjct 504497 TTTGGACAATTTCCCAAGTCTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGAT 504438 Query 72731 TAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTA 72790 || ||| | ||| | | | |||||| ||| || |||||| ||| |||| Sbjct 504437 CAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTA 504378 Query 72791 GATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG--TTG-TGTAGTAC 72847 ||||| | || | ||| || || | | |||||||||||||| | | ||| || Sbjct 504377 AGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATAT 504318 Query 72848 AAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 72905 || || || |||| || || | | | || ||||| || ||||| || |||| ||| Sbjct 504317 AA---GCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 504263 Score = 284 bits (314), Expect = 2e-71 Identities = 597/884 (68%), Gaps = 12/884 (1%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| || || | ||||||||||| || || || || | | || || || Sbjct 161102 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 161043 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||| || || || ||||| ||||| | || | |||| | |||| ||| || | Sbjct 161042 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACATCCTAATGCAATCAGT 160983 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 | ||||||||| | || || | ||| ||||| || |||||| || | | Sbjct 160982 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 160923 Query 41954 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 || || || || || |||| ||| | ||||| ||||||| || || || || || || Sbjct 160922 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 160864 Query 42013 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 42072 ||| || ||| ||| || | || |||||| ||| | |||||| || || Sbjct 160863 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 160804 Query 42073 ATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 42132 |||| || | ||| |||||||||| ||| | |||||||| ||||| | || ||||| Sbjct 160803 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 160744 Query 42133 TAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTC 42192 | || | |||||| | ||| || || || |||||||| ||||| ||||| || ||||| Sbjct 160743 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 160684 Query 42193 TACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT---ATCCACTT 42249 || || ||||| || | | |||||| || | ||| | || | ||||| || Sbjct 160683 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTT 160624 Query 42250 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 42309 | ||||| |||||||| | || | ||| || || ||||| || ||||| || | | Sbjct 160623 TAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAA 160564 Query 42310 GtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATG 42369 | |||| || |||||| | || ||||| ||||| | | ||| |||| ||||| Sbjct 160563 TTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATG 160504 Query 42370 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTT- 42428 ||||||||| || || || || || ||||||||| | ||||| | || || || | Sbjct 160503 AATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATC 160444 Query 42429 -CTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAAC 42487 || | ||| || ||| |||||||||| || ||||| || ||| || ||||| ||| Sbjct 160443 ACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAAC 160386 Query 42488 GCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT---TTATTCCAATCATTG 42544 || | || | || || || |||| | | ||| || |||||||||| Sbjct 160385 GCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGC 160326 Query 42545 ATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATAC 42604 | |||||| || | ||| | ||| || | ||||| || |||||||||||||| || ||| Sbjct 160325 AAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTAC 160266 Query 42605 ATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCT 42648 || | ||| || || ||||| | ||||| || | |||||| || Sbjct 160265 ATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 160222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671118377906320