Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2136 84.2 3e-11 >seq2136 Length=187745 Score = 84.2 bits (92), Expect = 3e-11 Identities = 261/390 (67%), Gaps = 18/390 (5%) Strand=Plus/Minus Query 69890 AACCTACCTCTGTTGACGACCAAGACTGTCTTTGTCAAGGGCGTCATCGAGGAGCTCTTG 69949 ||| | || || ||||| ||||||| ||||| ||||||||||| || || || || Sbjct 71187 AACTTCCCCCTCTTGACCACCAAGAAGGTCTTCCTCAAGGGCGTCCTCCTAGAACTGCTG 71128 Query 69950 TGGATGATTTCCGGATCGACCAATGCCAAAGAGCTGAGCCGAAAGGGTGTACACATTTGG 70009 ||| | || || || || | || ||| || ||| | |||| || | || ||| Sbjct 71127 TGGTTCATCAAAGGTTCCACAGACGCAAAACTCCTCAGCGAACAGGGAGTTAAAATATGG 71068 Query 70010 AGCGGCAACAGTAGTCGAAGCGTTT-TGGATTCGCTCGGCTTCACCGACAGACAAGAGGG 70068 ||| ||| | ||| | || | || ||||||||| | |||| | ||| || Sbjct 71067 GACGGTAACGGGTCCCGA-GAGTACCTTGACTCGCTCGGCCTACACGACCGTGAAGCTGG 71009 Query 70069 CGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCA-CTCGG-GCACCAAGTATGTAGAC 70126 |||| |||| ||||||||||||||||| ||||| || |||| || || ||| ||| Sbjct 71008 CGATTTGGGCCCAGTGTACGGATTCCAATGGAGACATTTCGGTGCTCC--CTATAGAGAT 70951 Query 70127 TGCGAGACAGACTATTCGGGTCAGGGTGTTGATC-AATTG--CAGACAATCATTGACACT 70183 ||| | | || || | | |||| || || | ||||| |||| |||| | ||| Sbjct 70950 TGCCACAGCGATTACACCAATGAGGGAGTCGACCAAATTGCTCAGATTATCA---AAACT 70894 Query 70184 CTCAAGACCAATCCAACAGATAGGAGGATCGT--AATGTGCTCATGGAATCCTGCAG-AT 70240 || || || || || ||| | ||||| | || |||| |||||||| || | || Sbjct 70893 CTGAAAACAAACCCCTATGATCGTAGGATAATTCTATCTGCT--TGGAATCCGGCTGCAT 70836 Query 70241 TTGCACCAAATGGCACTACCACCGTGTCAC 70270 |||| | | ||||| ||||||| || ||| Sbjct 70835 TTGC-CGATATGGCTTTACCACCTTGCCAC 70807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741036208638320