Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2131 120 5e-23
seq2120 107 3e-19
seq463 107 3e-19
>seq2131
Length=217070
Score = 120 bits (132), Expect = 5e-23
Identities = 179/253 (71%), Gaps = 1/253 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
||||| || |||||||||||||||| || ||||||||||| || | | | ||| |
Sbjct 162905 AGATC-CTCAGAGATAACATCCAAGGTATTACCAAGCCAGCAATTAGAAGATTAGCTAGA 162847
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| |||||| | |||| | ||| | || ||||| || | | ||| | |||
Sbjct 162846 AGAGGTGGTGTCAAGAGAATCTCGGCTTTGATTTACGAAGAAGTTAGGGCAGTTCTTAAG 162787
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
| ||||| | | ||| || ||||| || ||||| || ||||| || | |||
Sbjct 162786 ACTTTCCTTGAAAACGTCATTAGAGATGCAGTCACTTATACTGAACACGCAAAGAGAAAG 162727
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|| ||||||||| | ||| |||||||||| ||||| | ||||| | | ||||||||
Sbjct 162726 ACCGTCACCTCCTTAGATGTCGTCTATGCTTTGAAGAGACAAGGTAGAACCCTTTATGGT 162667
Query 16688 TTTGGAAGTTAAT 16700
||||| ||| ||
Sbjct 162666 TTTGGTGGTTGAT 162654
>seq2120
Length=553244
Score = 107 bits (118), Expect = 3e-19
Identities = 175/251 (70%), Gaps = 1/251 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
||||| ||| |||||||||||||||| || ||||||||||| ||| | | | ||| |
Sbjct 489839 AGATC-CTTAGAGATAACATCCAAGGTATTACCAAGCCAGCAATCAGAAGATTAGCTAGA 489781
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || ||| | | || | ||| | || ||||| | | | ||| | |||
Sbjct 489780 AGAGGTGGTGTTAAGAGAATTTCAGCTTTGATTTACGAAGAAGTCAGAGCCGTTCTTAAG 489721
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
| |||||| | | |||||| || || || |||||||| ||||| || | |||
Sbjct 489720 ACCTTCCTTGAAAACGTTATTAGAGACGCAGTCACTTATACCGAACACGCAAAGAGAAAG 489661
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|| || || || | ||| | |||||||||||||| | ||||| | | |||| |||
Sbjct 489660 ACCGTTACTTCTCTAGATGTTGTCTATGCATTGAAGAGACAAGGTAGAACCCTTTACGGT 489601
Query 16688 TTTGGAAGTTA 16698
||||| ||||
Sbjct 489600 TTTGGTGGTTA 489590
>seq463
Length=1056
Score = 107 bits (118), Expect = 3e-19
Identities = 175/251 (70%), Gaps = 1/251 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
||||| ||| |||||||||||||||| || ||||||||||| ||| | | | ||| |
Sbjct 465 AGATC-CTTAGAGATAACATCCAAGGTATTACCAAGCCAGCAATCAGAAGATTAGCTAGA 407
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || ||| | | || | ||| | || ||||| | | | ||| | |||
Sbjct 406 AGAGGTGGTGTGAAGAGAATTTCAGCTTTGATTTACGAAGAAGTCAGAGCCGTTCTTAAG 347
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
| |||||| | | |||||| || || || |||||||| ||||| || | |||
Sbjct 346 ACCTTCCTTGAAAACGTTATTAGAGACGCAGTCACTTATACCGAACACGCAAAGAGAAAG 287
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|| || || || | ||| | |||||||||||||| | ||||| | | |||| |||
Sbjct 286 ACCGTTACTTCTCTAGATGTTGTCTATGCATTGAAGAGACAAGGTAGAACCCTTTACGGT 227
Query 16688 TTTGGAAGTTA 16698
||||| ||||
Sbjct 226 TTTGGTGGTTA 216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79072930690026
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |