Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq2119 251 8e-62
>seq2119
Length=607893
Score = 251 bits (278), Expect = 8e-62
Identities = 600/900 (67%), Gaps = 17/900 (2%)
Strand=Plus/Minus
Query 21200 ACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAAT 21259
||||| ||||||||||| ||||| || || | | || || |||||||| || |||
Sbjct 161087 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 161028
Query 21260 GGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAATAATCTATCTGCTACA 21319
|||||| | | ||| || | ||| || | | | | || ||||||||| |||
Sbjct 161027 GGATTTGTAACGTCGTATACCTTTTCACATCCTAATGCAATCAGTAGTCTATCTGCAACA 160968
Query 21320 AATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTACAGGAAGAGCT 21379
|| || | ||| |||||||| || || ||||||||||| ||| || ||||| || ||
Sbjct 160967 AACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGGCG 160908
Query 21380 TTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATTTATTATCCTAGAT 21439
| || || | ||||| ||| |||||||| ||| || | | | | | |
Sbjct 160907 TCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTTTT 160848
Query 21440 --GTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACAATGCAAAC 21497
|| || |||| || || ||| ||| | |||||| |||||||| ||| ||||
Sbjct 160847 TCGT-CT-GGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 160790
Query 21498 CTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTT 21557
||||||| |||| || | || || || || || ||||| ||||| || ||||||||||
Sbjct 160789 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 160730
Query 21558 TTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATG 21617
| ||||| || || || ||||||| || || |||||||| || ||||| ||||||||||
Sbjct 160729 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 160670
Query 21618 CAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTG 21677
| || || | || | | | |||||||| ||||||||| ||||||| |
Sbjct 160669 CCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGG 160610
Query 21678 CCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGATGAtt-tttttCATC 21735
||||||| || ||||| ||||| ||||| || || || |||| ||| |||| |
Sbjct 160609 CCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA--ATTCACTTTCCTT 160552
Query 21736 TACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTAT 21795
| ||| | ||| | ||| |||| ||||| || ||||| ||
Sbjct 160551 TGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCAT 160492
Query 21796 CGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAAC--CTCGGAATAAAAT 21853
| || || || || || |||||| | ||||||| | |||||| | | | ||| |
Sbjct 160491 CATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATT 160432
Query 21854 CGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTT 21913
| | | | || |||||||| ||||| |||||| || ||||| || || | | ||
Sbjct 160431 C--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTT 160374
Query 21914 TTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAATCTAATAAATCTTTTGAT 21970
|| || ||| ||| || || | ||| || |||||||| |||||||| ||
Sbjct 160373 GAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAG 160314
Query 21971 AAATCTACTTCTTCAGTTGTCCA-AAAGCTAGCAATAGCCTTTTTATACATAATCCAGAT 22029
| ||| | ||| || | ||||| |||| | || ||||| || ||||| ||| ||
Sbjct 160313 AGATCAATTTCCTCCGCAGTCCAGAAAGAT-GCTTCTGCCTTCTTGTACATTTGCCAAAT 160255
Query 22030 ATCATTATATATTATTGGAAATATTACAAACCTGTTATTTGATTCAACTAAAAGTGGTTC 22089
|| | ||| | |||||||| | |||||||| | || ||| ||||||||||||
Sbjct 160254 TTCGTGATACTTGATTGGAAAGAGAACAAACCTTCTCTTGTTTTCCTTTAAAAGTGGTTC 160195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531884297777680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |