Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq2119 251 8e-62 >seq2119 Length=607893 Score = 251 bits (278), Expect = 8e-62 Identities = 600/900 (67%), Gaps = 17/900 (2%) Strand=Plus/Minus Query 21200 ACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAAT 21259 ||||| ||||||||||| ||||| || || | | || || |||||||| || ||| Sbjct 161087 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 161028 Query 21260 GGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAATAATCTATCTGCTACA 21319 |||||| | | ||| || | ||| || | | | | || ||||||||| ||| Sbjct 161027 GGATTTGTAACGTCGTATACCTTTTCACATCCTAATGCAATCAGTAGTCTATCTGCAACA 160968 Query 21320 AATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTACAGGAAGAGCT 21379 || || | ||| |||||||| || || ||||||||||| ||| || ||||| || || Sbjct 160967 AACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGGCG 160908 Query 21380 TTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATTTATTATCCTAGAT 21439 | || || | ||||| ||| |||||||| ||| || | | | | | | Sbjct 160907 TCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTTTT 160848 Query 21440 --GTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACAATGCAAAC 21497 || || |||| || || ||| ||| | |||||| |||||||| ||| |||| Sbjct 160847 TCGT-CT-GGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 160790 Query 21498 CTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTT 21557 ||||||| |||| || | || || || || || ||||| ||||| || |||||||||| Sbjct 160789 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 160730 Query 21558 TTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATG 21617 | ||||| || || || ||||||| || || |||||||| || ||||| |||||||||| Sbjct 160729 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 160670 Query 21618 CAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTG 21677 | || || | || | | | |||||||| ||||||||| ||||||| | Sbjct 160669 CCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGG 160610 Query 21678 CCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGATGAtt-tttttCATC 21735 ||||||| || ||||| ||||| ||||| || || || |||| ||| |||| | Sbjct 160609 CCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA--ATTCACTTTCCTT 160552 Query 21736 TACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTAT 21795 | ||| | ||| | ||| |||| ||||| || ||||| || Sbjct 160551 TGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCAT 160492 Query 21796 CGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAAC--CTCGGAATAAAAT 21853 | || || || || || |||||| | ||||||| | |||||| | | | ||| | Sbjct 160491 CATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATT 160432 Query 21854 CGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTT 21913 | | | | || |||||||| ||||| |||||| || ||||| || || | | || Sbjct 160431 C--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTT 160374 Query 21914 TTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAATCTAATAAATCTTTTGAT 21970 || || ||| ||| || || | ||| || |||||||| |||||||| || Sbjct 160373 GAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAG 160314 Query 21971 AAATCTACTTCTTCAGTTGTCCA-AAAGCTAGCAATAGCCTTTTTATACATAATCCAGAT 22029 | ||| | ||| || | ||||| |||| | || ||||| || ||||| ||| || Sbjct 160313 AGATCAATTTCCTCCGCAGTCCAGAAAGAT-GCTTCTGCCTTCTTGTACATTTGCCAAAT 160255 Query 22030 ATCATTATATATTATTGGAAATATTACAAACCTGTTATTTGATTCAACTAAAAGTGGTTC 22089 || | ||| | |||||||| | |||||||| | || ||| |||||||||||| Sbjct 160254 TTCGTGATACTTGATTGGAAAGAGAACAAACCTTCTCTTGTTTTCCTTTAAAAGTGGTTC 160195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531884297777680