Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2119 428 6e-115 >seq2119 Length=607893 Score = 428 bits (474), Expect = 6e-115 Identities = 1400/2158 (65%), Gaps = 39/2158 (2%) Strand=Plus/Minus Query 61988 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 62047 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 506389 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 506330 Query 62048 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 62107 || || || |||| || || |||||||| ||||| ||| | |||| Sbjct 506329 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 506270 Query 62108 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62167 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 506269 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 506210 Query 62168 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62226 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 506209 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 506151 Query 62227 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 62283 |||| || | || |||||||| || ||| ||||| || || || || || Sbjct 506150 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 506091 Query 62284 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 62343 ||||||||| | | | || |||| |||| | | || || || || | || | Sbjct 506090 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGA 506031 Query 62344 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCAT 62403 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 506030 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 505971 Query 62404 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 62463 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 505970 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 505911 Query 62464 TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG-- 62521 | | ||| | | ||||||| || |||| | ||||| | | | | | || Sbjct 505910 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCT 505851 Query 62522 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 62581 | || ||||| | ||| | || |||||| || | || Sbjct 505850 TCTTACCCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGT 505793 Query 62582 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 62641 || |||||||| ||| | || || |||| ||| ||||| || ||| | | |||||| Sbjct 505792 CTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAAT 505733 Query 62642 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT-A 62700 |||||| || || | |||| || || | |||||| | ||||||||| |||| | | Sbjct 505732 GGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCA 505674 Query 62701 AGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62760 | | || || || || || || ||||| ||||||| | | || ||||| | |||| ||| Sbjct 505673 ACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATAT 505614 Query 62761 TAGAGAT---TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 62817 | || | | ||| ||| || |||||| || || |||| || |||||||| | | Sbjct 505613 TTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGT 505557 Query 62818 TTCT-GACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATCGC 62867 || | | || ||||| | ||| |||| |||| | || || || Sbjct 505556 TTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAA--CAGTTCTT 505499 Query 62868 C-CATCTATTACAA-ACATGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTC 62923 |||| || ||| | ||| ||| |||||| || | ||||||||| ||| || Sbjct 505498 GTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTC 505439 Query 62924 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAA 62983 | || | ||||| | || ||| ||| | ||| | | |||||| || || Sbjct 505438 CTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAA 505379 Query 62984 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 63043 ||||||||||||| || |||||||| ||||||||||| | ||||| || |||||||| Sbjct 505378 ATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGT 505319 Query 63044 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 63103 |||| | |||| ||||| |||| | ||| | | | || || ||| | || Sbjct 505318 TTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCC 505259 Query 63104 TCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63163 ||| | ||||||||| ||| ||||| ||| || ||| || || || | |||| Sbjct 505258 TCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACT 505199 Query 63164 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63223 ||| ||||| |||| || | | || | ||| ||| | | | || |||| || Sbjct 505198 CAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTC 505139 Query 63224 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63283 |||||| | |||||||||||| | ||| |||| |||||| | |||| ||| || || Sbjct 505138 CATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTT 505079 Query 63284 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63343 || || || | | ||| | || | | |||||| |||||||| || || | || Sbjct 505078 ACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATA 505019 Query 63344 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63403 || || | | ||||| | ||| || || || || || | || || || |||||||| Sbjct 505018 TAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATT 504959 Query 63404 ATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCT 63463 | | || || | |||||||||||| || || ||| ||||||| ||||||| ||||| Sbjct 504958 AAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGA 504899 Query 63464 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63523 ||| | | | ||||||| || || || || || || || |||| || || || Sbjct 504898 ACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAA 504839 Query 63524 TGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAG 63583 || ||| ||| || || ||||||||||| || ||| ||| || |||| || || Sbjct 504838 AGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAA 504779 Query 63584 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 63643 ||||| ||||||||| | | ||| |||| ||| || | || |||||||| || Sbjct 504778 GAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATG 504719 Query 63644 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG 63703 || || | | | || | | ||| || || |||||| | || || ||||| Sbjct 504718 TGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACC 504659 Query 63704 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 63763 |||||| || || || || | ||||| | || || || ||||| | ||||| || Sbjct 504658 ATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATT 504599 Query 63764 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 63823 |||| | || | || |||| || ||||| |||||||||||||| || ||||| Sbjct 504598 TATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTC 504539 Query 63824 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGT 63883 || || ||| ||| | | | | ||| | || ||| | || || ||| || Sbjct 504538 TCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGT 504479 Query 63884 GATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 63943 ||||||| || |||| | |||| ||||||||||||| || ||| | ||| | Sbjct 504478 CTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTG 504419 Query 63944 CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCT 64003 | | |||||| ||| || |||||| ||| |||| ||||| | || | ||| Sbjct 504418 ATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCT 504359 Query 64004 GGCGGCTAGAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGC 64060 || || | | |||||||| ||||| | | ||| || || || || |||| || Sbjct 504358 AGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGC 504302 Query 64061 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTC 64118 || | | | || ||||| || ||||| || |||| ||| | || ||||| |||| Sbjct 504301 AGCTAAATTATCTAATTCGACAGTTGTAACACCATCATAAACACCAGAAATAATCTTC 504244 Score = 306 bits (338), Expect = 5e-78 Identities = 604/885 (68%), Gaps = 14/885 (2%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| || || | ||||||||||| || ||||| || | | || || || Sbjct 161102 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 161043 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||| || || || ||||| ||||| | || | |||| | |||| ||| || | Sbjct 161042 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACATCCTAATGCAATCAGT 160983 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | |||||| || || || || | ||| ||||| || |||||| || | | Sbjct 160982 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 160923 Query 33193 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 || || || || || |||| ||| | ||||| |||||| || || || || || || Sbjct 160922 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 160864 Query 33252 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311 ||| || ||| ||| || | ||| |||||| ||| | |||||| || || Sbjct 160863 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 160804 Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371 |||| || | ||| || ||||||| ||| || |||||||| ||||| | || ||||| Sbjct 160803 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 160744 Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431 | || | |||||| | ||| || ||||| || ||||| ||||| ||||| || ||||| Sbjct 160743 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 160684 Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGCTGTCATGT---ATCCACT 33487 || |||||||| || | | |||||| || | | || || | || | ||||| | Sbjct 160683 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTT-ATCTGCAATCCATT 160625 Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33547 || ||||| |||||||| | || | ||| || || ||||| || ||||| || | Sbjct 160624 TTAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA 160565 Query 33548 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33607 | | |||| || |||||| | |||||||| ||||| | | ||| ||||||||| Sbjct 160564 ATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAAT 160505 Query 33608 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 33667 |||||||||| || || || || || ||||||||| ||||||| | ||| || || | Sbjct 160504 GAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACAT 160445 Query 33668 CTGT--ACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33725 | | | ||| || || | ||||||||||| ||||| || ||| || ||||| || Sbjct 160444 CACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAA 160387 Query 33726 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATT 33782 ||| | || | || || || |||| | | | | | || |||||||||| Sbjct 160386 CGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATG 160327 Query 33783 GATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33842 | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || || Sbjct 160326 CAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTA 160267 Query 33843 CATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887 ||| | ||| || || | ||| | |||||| || | |||||| || Sbjct 160266 CATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 160222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622927873063120