Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2119 185 2e-41 >seq2119 Length=607893 Score = 185 bits (204), Expect = 2e-41 Identities = 496/749 (66%), Gaps = 22/749 (3%) Strand=Plus/Plus Query 22214 TTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTG 22273 ||||||| ||||||||| | | || |||||||| ||| ||| |||| ||||| Sbjct 160379 TTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTCAATGAAAATTTAGTTGAGAATTTCT 160438 Query 22274 CATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAA 22333 || ||| ||||| |||||||| | |||||||||||| | ||||| ||||| |||| Sbjct 160439 CAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAA 160498 Query 22334 ATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAAC 22393 | |||| ||||||| |||||| | || | | | | | ||||| | | ||| Sbjct 160499 ACATTCATTCGGAAACTTATTCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAA- 160557 Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGG 22452 | ||| ||||||| || ||| || || | || || ||| | ||||| || ||| Sbjct 160558 AGTGAATTCTTATTCAATGCAATTGAAACAATCCCATGTATCAAGGAAAAGGCCGAATGG 160617 Query 22453 GCGCTGAAATGGATGAACAATGAA----CGTTCATTCGCGGAACGTCTTATTGCATTTGC 22508 || | |||||||| || || |||| || || || | | | |||||||| Sbjct 160618 GCCTTAAAATGGATTGCAGATAAAGATGCGTTGTTT-GCAGAGAGGTTGGTGGCATTTGC 160676 Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568 || |||||||| |||||||| ||||| ||||| | ||||| ||| | ||||| | Sbjct 160677 TGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAG 160736 Query 22569 TGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCA 22628 | | ||||| ||| | ||||| || || ||| | ||| | ||||||| ||| | || Sbjct 160737 AGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACA 160796 Query 22629 TACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATG---A 22685 |||||||||||| ||| |||| | | ||| | | |||| ||| | | | Sbjct 160797 TACCGATTTTGCTTGTTTGCTCTTT---TCACATTTGAACCATA---CCCCAGACGAAAA 160850 Query 22686 AACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGC 22745 || ||| | || ||||| | || ||||| ||||| || | || || Sbjct 160851 AATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAAAAGAAATACTTCACTGACGC 160910 Query 22746 GTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGT 22805 |||| || | | | ||||| ||| || | ||| || ||| | | ||||| Sbjct 160911 CCTACCTGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTATGTCGAGTTTGT 160970 Query 22806 TGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTT---AATCC 22862 ||||||| | ||| | ||| || | || | || |||| ||| ||| |||| ||||| Sbjct 160971 TGCAGATAGACTACTGATTGCATTAGGATGTGAAAAG--GTAT-ACGACGTTACAAATCC 161027 Query 22863 ATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGT 22922 ||| || | ||||| ||||| |||| || || || || || |||||||| ||||| Sbjct 161028 ATTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAAACAAACTTTTTCGAAAAGAGAGT 161087 Query 22923 TGGTGAATACCAAAAAGCAGGTGTTATGG 22951 || |||||||| |||||||| |||| Sbjct 161088 CTCCGACTACCAAAAGGCAGGTGTCATGG 161116 Score = 174 bits (192), Expect = 4e-38 Identities = 722/1120 (64%), Gaps = 38/1120 (3%) Strand=Plus/Plus Query 363091 GGTCTATATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCCGTAGAAACTGCAACT 363150 ||| | |||||||||||||||||||| | |||| ||| | || | |||||||| || Sbjct 504257 GGTGTTTATGATGGTGTTACAACTGTCGAATTAGATAATTTAGCTGCTGAAACTGCTGCT 504316 Query 363151 TATCTGACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGCATTGCAGTTTCGTCT 363210 ||| |||| | | ||||| ||||| | | |||||||| | ||||| |||| Sbjct 504317 TATATGACAACTATCCATCCAGATTATGCGGTATTGGCTGCTAGAGTTGCAATTTCAAAC 504376 Query 363211 CTTCATAAAATGACATCAAATAAGTTTTCCAGTGTCATGGATAGTCTGTATAACTATGTC 363270 | || || ||| | || || || || || | || || |||| ||| | Sbjct 504377 TTACAAAAGCAAACAACTAAGAAATTCTCTGAAGTTGTTAATCAACTATATACTTATATT 504436 Query 363271 AATACAAAGACCGGTAAGTGGTCACCACTCATTGCCGATGACATTATTGAATGTATCCGT 363330 || | || | ||||| | ||| | ||| | | || | | ||| | ||| Sbjct 504437 GATCCTAAAAATGGTAAACCTGCTCCAATGATTTCAAAGGAGACTTGGGAAATTGTCCAA 504496 Query 363331 TCTAATGCGGAAGTTTTCGATGACGTTATCAATTATGAGAAGGATCTCGAGTATGA-TAT 363389 |||||| | | || ||||| | || ||||||| | || || | ||| | ||| Sbjct 504497 AAAAATGCGAATATATTAGATGATGCAATTCATTATGATAGAGACTTCAATTATAACTAT 504556 Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449 ||| || | || || | || | || || | | || |||||| | |||| || Sbjct 504557 TTT-GGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGAATAAATGGTAAGATTGCCGA 504615 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 | | || || ||| | ||||| | ||||| ||||||| ||| | ||| ||||| | Sbjct 504616 AAGGCCCCAACATTTAATAATGAGAGTTGCCGTTGGTATTCATGGTGATGATATTGATTC 504675 Query 363510 CGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAA 363565 | |||||||| ||||| | || ||| | || | ||||| || || | |||| Sbjct 504676 TGTTATTGAAACTTATAATTTGATGTCAAAGAG---GTAT-TTCACACATGCTTCTCCAA 504731 Query 363566 CAATGTACAATGCTGGAACTC---GTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAA 363621 | | | |||| | || |||| | |||| | |||||||| || |||||| | | Sbjct 504732 CTCTTTTCAATTCGGGTACTCCAAGAAATCAA---ATGTCTTCATG-TTTCTTAGTTGCA 504787 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||||||||||||||| || ||||||| ||| || | || | |||||| | |||||| Sbjct 504788 ATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAATGTGCTTTGATTTCC 504847 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG----TTA 363737 || | ||| || || ||||| || || || ||| || | | ||| | ||| Sbjct 504848 AAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATC----AACTGGTTCTTA 504903 Query 363738 CATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 ||| ||| || | || | | || |||||| | |||| ||| || | || ||| | | Sbjct 504904 TATTGCCGGTACTAATGGTACA-TCCAATGGGATTATTCCAATGATTAGGGTCTTTAATA 504962 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 | ||||| ||||| || ||||| ||||| | |||| | || |||||||| | || Sbjct 504963 ACACTGCAAGGTATGTTGACCAAGGTGGTAATAAAAGACC--TGGTGCGTTTGCACTATA 505020 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAA 363914 | | |||||| ||| | |||||| |||| ||| |||| || |||||||| || || Sbjct 505021 TATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAACCACGGTAA 505080 Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAA 363974 ||| ||| | | ||| | ||| | ||| ||| | ||| || |||| |||||| | Sbjct 505081 AGAAGAAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTGATTTATTTATGGA 505140 Query 363975 GCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034 | || ||| | | | ||||| | |||| | ||| ||| || ||| | Sbjct 505141 AAGAGTTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAGCACCTGGTTTGAG 505200 Query 364035 CGATGTATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATG-AATCGGAGGGAAA 364091 ||||||| ||||| || | | | ||||| ||| |||| || | ||| | | Sbjct 505201 TGATGTATATGGTGATGAATTCAAAGAATTATATACCAAA--TATGAAAGAGAAGGTAGA 505258 Query 364092 GGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGA 364151 ||| | | |||||| ||||| ||| |||||| | | ||| | || | || | ||| Sbjct 505259 GGC-AGGAGAACAATTAAAGCACAAAAGTTATGGTATTCGATCTTAGAAGCTCAAACTGA 505317 Query 364152 GACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAAC 364191 || || ||||| | ||||| || || ||| | || ||| Sbjct 505318 AACTGGTACACCTTTCATGTTATATAAGGATGCATGTAAC 505357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303312152540924