Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2206 159 3e-34 seq2142 150 2e-31 >seq2206 Length=14499 Score = 159 bits (176), Expect = 3e-34 Identities = 174/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||||| || ||||| | || || | ||||| ||||| ||| Sbjct 8954 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 9013 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||||| || || ||| |||||| ||||| ||||| ||||||||||||| Sbjct 9014 GACACTATCGA--CAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACC 9071 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | |||| ||||| || || ||||||||||||| | | ||| || || |||| Sbjct 9072 AACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACA 9131 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | |||||||| ||||| || || || ||||| | || ||||||| || Sbjct 9132 ACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 9180 Score = 159 bits (176), Expect = 3e-34 Identities = 174/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||||| || ||||| | || || | ||||| ||||| ||| Sbjct 11916 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 11975 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||||| || || ||| |||||| ||||| ||||| ||||||||||||| Sbjct 11976 GACACTATCGA--CAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACC 12033 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | |||| ||||| || || ||||||||||||| | | ||| || || |||| Sbjct 12034 AACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACA 12093 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | |||||||| ||||| || || || ||||| | || ||||||| || Sbjct 12094 ACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 12142 >seq2142 Length=155211 Score = 150 bits (166), Expect = 2e-31 Identities = 172/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| || |||||||| |||| || | ||||| || || ||| Sbjct 147541 ATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 147600 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || |||||||| ||| || || ||||| ||||||||||||| Sbjct 147601 GACACCATCGA--CAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACC 147658 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | |||| ||||| || || ||||||||||||| | | ||| | ||| |||| Sbjct 147659 AACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACA 147718 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| ||||| || || || || || | || | ||||| || Sbjct 147719 ACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 147767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433314892098830