Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2142 168 6e-37 seq2206 156 4e-33 >seq2142 Length=155211 Score = 168 bits (186), Expect = 6e-37 Identities = 184/244 (75%), Gaps = 3/244 (1%) Strand=Plus/Plus Query 22203 TTATACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCT 22262 ||||||| || ||||||||||||||||| || || ||||||||||| || | || | Sbjct 147528 TTATACA---GTCAAGATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTT 147584 Query 22263 TGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGG 22322 ||||| ||| | | || ||| | ||| || |||| ||||| || ||||| ||||| || Sbjct 147585 AGAAGTTGAATCTTCTGACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGG 147644 Query 22323 TATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCAC 22382 ||||||||| || |||||| | ||||| ||||| || || || ||||| ||| | || Sbjct 147645 TATTCCACCTGACCAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAAC 147704 Query 22383 CGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGG 22442 | ||||| |||||||| ||||| ||||| ||| | || || || ||| ||||| | || Sbjct 147705 TTTATCCGACTACAACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGG 147764 Query 22443 AGGT 22446 ||| Sbjct 147765 TGGT 147768 >seq2206 Length=14499 Score = 156 bits (172), Expect = 4e-33 Identities = 167/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 ||||||||||||||||||||||||||||| ||||| || | || | ||||| || | Sbjct 8951 AAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCA 9010 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| || |||| ||||| ||||||||||| ||||||||||| || Sbjct 9011 TCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 9070 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||| | ||||| ||||| || || || ||||| ||| | || | || || ||| Sbjct 9071 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTAC 9130 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 ||||||||||| ||||| || | || ||||| ||| |||| Sbjct 9131 AACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATT 9171 Score = 156 bits (172), Expect = 4e-33 Identities = 167/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 ||||||||||||||||||||||||||||| ||||| || | || | ||||| || | Sbjct 11913 AAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCA 11972 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| || |||| ||||| ||||||||||| ||||||||||| || Sbjct 11973 TCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 12032 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||| | ||||| ||||| || || || ||||| ||| | || | || || ||| Sbjct 12033 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTAC 12092 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 ||||||||||| ||||| || | || ||||| ||| |||| Sbjct 12093 AACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATT 12133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419715303490330