Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq2142 168 6e-37
seq2206 156 4e-33
>seq2142
Length=155211
Score = 168 bits (186), Expect = 6e-37
Identities = 184/244 (75%), Gaps = 3/244 (1%)
Strand=Plus/Plus
Query 22203 TTATACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCT 22262
||||||| || ||||||||||||||||| || || ||||||||||| || | || |
Sbjct 147528 TTATACA---GTCAAGATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTT 147584
Query 22263 TGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGG 22322
||||| ||| | | || ||| | ||| || |||| ||||| || ||||| ||||| ||
Sbjct 147585 AGAAGTTGAATCTTCTGACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGG 147644
Query 22323 TATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCAC 22382
||||||||| || |||||| | ||||| ||||| || || || ||||| ||| | ||
Sbjct 147645 TATTCCACCTGACCAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAAC 147704
Query 22383 CGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGG 22442
| ||||| |||||||| ||||| ||||| ||| | || || || ||| ||||| | ||
Sbjct 147705 TTTATCCGACTACAACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGG 147764
Query 22443 AGGT 22446
|||
Sbjct 147765 TGGT 147768
>seq2206
Length=14499
Score = 156 bits (172), Expect = 4e-33
Identities = 167/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
||||||||||||||||||||||||||||| ||||| || | || | ||||| || |
Sbjct 8951 AAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCA 9010
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || || | ||| || |||| ||||| ||||||||||| ||||||||||| ||
Sbjct 9011 TCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 9070
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | ||||| ||||| || || || ||||| ||| | || | || || |||
Sbjct 9071 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTAC 9130
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
||||||||||| ||||| || | || ||||| ||| ||||
Sbjct 9131 AACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATT 9171
Score = 156 bits (172), Expect = 4e-33
Identities = 167/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
||||||||||||||||||||||||||||| ||||| || | || | ||||| || |
Sbjct 11913 AAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCA 11972
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || || | ||| || |||| ||||| ||||||||||| ||||||||||| ||
Sbjct 11973 TCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 12032
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | ||||| ||||| || || || ||||| ||| | || | || || |||
Sbjct 12033 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTAC 12092
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
||||||||||| ||||| || | || ||||| ||| ||||
Sbjct 12093 AACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATT 12133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419715303490330
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |