Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2119 100 5e-16 >seq2119 Length=607893 Score = 100 bits (110), Expect = 5e-16 Identities = 351/537 (65%), Gaps = 11/537 (2%) Strand=Plus/Plus Query 42612 TTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGG 42671 ||||| || || || || || || || |||||| | ||||| || ||||| | || ||| Sbjct 160570 TTCAATGCAATTGAAACAATCCCATGTATCAAGGAAAAGGCCGAATGGGCCTTAAAATGG 160629 Query 42672 ATCG-AGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGG 42730 || | ||| | || || ||| | |||||| |||| || ||| | || || || || Sbjct 160630 ATTGCAGA-TAAAGATGCGTTGTTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGG 160688 Query 42731 CATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGC 42789 || |||||||| || | || || |||||||||||| | || ||| |||| | ||||| Sbjct 160689 TATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGAGGT-TTGATGC 160747 Query 42790 CCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTG 42849 | || | || ||||| ||||| || || | || || || || | |||| || |||| Sbjct 160748 CAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTG 160807 Query 42850 CCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC-CTCGAAGGAGCGGGTCCGGGCC 42908 | || | || || || || | | || | || |||| | ||| | Sbjct 160808 CTTGTTTGCTCTTTTC---ACATTTGAACCATACCCCAGACGAA-AAAATTGTCAGACAA 160863 Query 42909 ATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCC 42968 ||||| || || ||||| || || || ||| | | | |||| | | || || || | Sbjct 160864 ATCATTACCGAAGCCGTTGATATTGAAAAGAAATACTTCACTGACGCCCTACCTGTCAAC 160923 Query 42969 CTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTC 43028 || |||| ||||| | || | ||||| |||| || ||| || || || || Sbjct 160924 TTGCTCGGTATGAATAAGGATTTGATGTGTCAGTATGTCGAGTTTGTTGCAGATAGACTA 160983 Query 43029 CTG-TGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGA 43087 ||| | || || | | | | | ||| || | || |||||||||||||| Sbjct 160984 CTGATTGCATTAGGATGTGAAAAG-GTATACGACGTTACAAATCCATTCGACTTTATGGA 161042 Query 43088 GAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 |||||| || | | || || || ||||||||||| ||| | ||| |||||||||| Sbjct 161043 GAACATTTCCCTTGCTGGTAAAACAAACTTTTTCGAAAAGAGAGTCTCCGACTACCA 161099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944309901876320