Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2119 185 1e-41 >seq2119 Length=607893 Score = 185 bits (204), Expect = 1e-41 Identities = 549/836 (66%), Gaps = 18/836 (2%) Strand=Plus/Minus Query 115561 AGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAAC 115620 ||||| ||||| || ||||||||||||| |||||| |||| | |||||| || | || Sbjct 506346 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 506287 Query 115621 TTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 115680 || | ||||||| ||| || || ||||||| ||| || ||||| | | | Sbjct 506286 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 506227 Query 115681 CCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAG 115740 || | ||| || |||||||| || | ||| | ||| ||||| ||||| | || Sbjct 506226 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 506167 Query 115741 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACC 115800 | || ||| || || | || |||| | | || || || || ||| | || Sbjct 506166 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 506107 Query 115801 ATGAGATCCTTCATA---TCCTTTGACCAGAGACCAATCTTCTTGAGATC-CTCCACGAG 115856 || | | |||||| || || |||||| || || | | ||| ||| || | Sbjct 506106 ATATGGTTTTTCATAGAATCATT---CCAGAGTCCCATTTCAACTAAATCTCTCAAC-AT 506051 Query 115857 GTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCG 115915 | ||||||| || ||||| || | | ||| ||| || || |||| | Sbjct 506050 ATAAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCT-AGAGTAAATATTGGAAG 505992 Query 115916 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 115975 |||| || |||||||| || |||| ||| | ||||| | ||| || || || ||||| | Sbjct 505991 TGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTG 505932 Query 115976 GTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCC 116035 |||| | || | || | | ||| || | || ||||| | | |||| Sbjct 505931 GTGCAACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 505872 Query 116036 AGTCGTAGTTGAGCT--TTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGA 116093 |||| || | || | ||| || | |||| | ||||||||| |||| ||||||||| Sbjct 505871 AGTCATA--TAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGA 505814 Query 116094 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC--GCCAATTCGGAGCTC 116151 || || ||||| ||||| ||||||||||| || || ||| | ||||| || Sbjct 505813 TGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTAATAGATAATTCAACACTT 505756 Query 116152 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 116211 ||||| | || || ||||| || || |||||||| || ||||| | |||| || || Sbjct 505755 GCCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCT 505696 Query 116212 TCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 116271 |||||||| | | | ||| || || |||| || | |||||||||||| | Sbjct 505695 GGCGAATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACA 505636 Query 116272 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTA 116331 ||||||| | | ||||||||| || | | || || || || ||||| | || ||| Sbjct 505635 GCAATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTA 505576 Query 116332 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 116387 ||||| | |||| | ||||| || ||||||||||| |||||||| | ||| || Sbjct 505575 TCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTC 505520 Score = 104 bits (114), Expect = 3e-17 Identities = 326/493 (66%), Gaps = 19/493 (4%) Strand=Plus/Minus Query 127553 ATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 127612 || || || || ||||| || ||||||||| | ||| | ||| ||||||||||| || Sbjct 160775 ATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATG 160716 Query 127613 GCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAATAGACGCTCG 127672 | |||||| ||||||||||| || || || ||| || || || | | | ||| Sbjct 160715 GATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCT 160656 Query 127673 GCAAAGGAGCGGGACTTTGTAT-CAAACCACTTCATCGCCCACTGTGCCTTTTTCTCGAT 127731 ||||| | || |||| | | ||| ||| || | ||||| | ||||||| || ||| Sbjct 160655 GCAAA-CAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGGCCTTTTCCTTGAT 160597 Query 127732 ACATGGGACGGTCTGGATCGC-TTCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGAT 127788 |||||||| || | || || || | |||| ||| |||| || |||||||||||| Sbjct 160596 ACATGGGATTGTTTCAATTGCATTGAATAAGAATTC--ACTTTCCT-TTGGATCTTTGAT 160540 Query 127789 GTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCATTT-CATTATGGCACTGAT 127847 ||| |||| || | | ||||| ||||| || | ||| ||| || || Sbjct 160539 GTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCAT-AATTTGGA 160481 Query 127848 ACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAAAATTGTTATTGATAT 127907 || | |||||| | || || || || || ||| | ||||| | | | || Sbjct 160480 ACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTCTCAACTAAAT 160421 Query 127908 TCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA---TATACTTTATGAATT 127964 | ||| || || ||||| || ||||||| ||||| || | | | | | |||| Sbjct 160420 TTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATC 160361 Query 127965 TCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCT 128021 | |||||| ||||||| | ||||| || | | ||| || |||||||| | | Sbjct 160360 T---TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTT 160304 Query 128022 CCTCCGCAGTCCA 128034 ||||||||||||| Sbjct 160303 CCTCCGCAGTCCA 160291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613488165939120