Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq2119 185 1e-41
>seq2119
Length=607893
Score = 185 bits (204), Expect = 1e-41
Identities = 549/836 (66%), Gaps = 18/836 (2%)
Strand=Plus/Minus
Query 115561 AGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAAC 115620
||||| ||||| || ||||||||||||| |||||| |||| | |||||| || | ||
Sbjct 506346 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 506287
Query 115621 TTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 115680
|| | ||||||| ||| || || ||||||| ||| || ||||| | | |
Sbjct 506286 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 506227
Query 115681 CCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAG 115740
|| | ||| || |||||||| || | ||| | ||| ||||| ||||| | ||
Sbjct 506226 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 506167
Query 115741 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACC 115800
| || ||| || || | || |||| | | || || || || ||| | ||
Sbjct 506166 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 506107
Query 115801 ATGAGATCCTTCATA---TCCTTTGACCAGAGACCAATCTTCTTGAGATC-CTCCACGAG 115856
|| | | |||||| || || |||||| || || | | ||| ||| || |
Sbjct 506106 ATATGGTTTTTCATAGAATCATT---CCAGAGTCCCATTTCAACTAAATCTCTCAAC-AT 506051
Query 115857 GTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCG 115915
| ||||||| || ||||| || | | ||| ||| || || |||| |
Sbjct 506050 ATAAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCT-AGAGTAAATATTGGAAG 505992
Query 115916 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 115975
|||| || |||||||| || |||| ||| | ||||| | ||| || || || ||||| |
Sbjct 505991 TGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTG 505932
Query 115976 GTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCC 116035
|||| | || | || | | ||| || | || ||||| | | ||||
Sbjct 505931 GTGCAACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 505872
Query 116036 AGTCGTAGTTGAGCT--TTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGA 116093
|||| || | || | ||| || | |||| | ||||||||| |||| |||||||||
Sbjct 505871 AGTCATA--TAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGA 505814
Query 116094 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC--GCCAATTCGGAGCTC 116151
|| || ||||| ||||| ||||||||||| || || ||| | ||||| ||
Sbjct 505813 TGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTAATAGATAATTCAACACTT 505756
Query 116152 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 116211
||||| | || || ||||| || || |||||||| || ||||| | |||| || ||
Sbjct 505755 GCCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCT 505696
Query 116212 TCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 116271
|||||||| | | | ||| || || |||| || | |||||||||||| |
Sbjct 505695 GGCGAATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACA 505636
Query 116272 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTA 116331
||||||| | | ||||||||| || | | || || || || ||||| | || |||
Sbjct 505635 GCAATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTA 505576
Query 116332 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 116387
||||| | |||| | ||||| || ||||||||||| |||||||| | ||| ||
Sbjct 505575 TCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTC 505520
Score = 104 bits (114), Expect = 3e-17
Identities = 326/493 (66%), Gaps = 19/493 (4%)
Strand=Plus/Minus
Query 127553 ATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 127612
|| || || || ||||| || ||||||||| | ||| | ||| ||||||||||| ||
Sbjct 160775 ATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATG 160716
Query 127613 GCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAATAGACGCTCG 127672
| |||||| ||||||||||| || || || ||| || || || | | | |||
Sbjct 160715 GATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCT 160656
Query 127673 GCAAAGGAGCGGGACTTTGTAT-CAAACCACTTCATCGCCCACTGTGCCTTTTTCTCGAT 127731
||||| | || |||| | | ||| ||| || | ||||| | ||||||| || |||
Sbjct 160655 GCAAA-CAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGGCCTTTTCCTTGAT 160597
Query 127732 ACATGGGACGGTCTGGATCGC-TTCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGAT 127788
|||||||| || | || || || | |||| ||| |||| || ||||||||||||
Sbjct 160596 ACATGGGATTGTTTCAATTGCATTGAATAAGAATTC--ACTTTCCT-TTGGATCTTTGAT 160540
Query 127789 GTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCATTT-CATTATGGCACTGAT 127847
||| |||| || | | ||||| ||||| || | ||| ||| || ||
Sbjct 160539 GTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCAT-AATTTGGA 160481
Query 127848 ACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAAAATTGTTATTGATAT 127907
|| | |||||| | || || || || || ||| | ||||| | | | ||
Sbjct 160480 ACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTCTCAACTAAAT 160421
Query 127908 TCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA---TATACTTTATGAATT 127964
| ||| || || ||||| || ||||||| ||||| || | | | | | ||||
Sbjct 160420 TTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATC 160361
Query 127965 TCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCT 128021
| |||||| ||||||| | ||||| || | | ||| || |||||||| | |
Sbjct 160360 T---TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTT 160304
Query 128022 CCTCCGCAGTCCA 128034
|||||||||||||
Sbjct 160303 CCTCCGCAGTCCA 160291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613488165939120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |