Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2142 127 5e-24 seq2206 123 6e-23 >seq2142 Length=155211 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| || || || |||||||||| ||||||||| | ||||| || || Sbjct 147756 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACC 147697 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | ||||| || || ||||| || | || ||||| || ||| ||||| Sbjct 147696 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 147637 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||||||||| || |||| |||||| | | ||| || || || || || Sbjct 147636 ATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAAT 147577 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | || || ||||||||||| Sbjct 147576 GGTCTTACCGGTTAAGGTCTTGACAAAAATTTG 147544 >seq2206 Length=14499 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| ||||| || |||||||| | ||||||||||| |||||| || || Sbjct 9169 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 9110 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | ||||| || || ||||| || | || ||||| || ||| ||||| Sbjct 9109 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 9050 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || ||| || |||| ||||| | || || || || || || || Sbjct 9049 GTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAAT 8990 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | |||||| ||||||||||| Sbjct 8989 AGTCTTACCAGTTAAAGTTTTAACAAAAATTTG 8957 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| ||||| || |||||||| | ||||||||||| |||||| || || Sbjct 12131 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 12072 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | ||||| || || ||||| || | || ||||| || ||| ||||| Sbjct 12071 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 12012 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || ||| || |||| ||||| | || || || || || || || Sbjct 12011 GTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAAT 11952 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | |||||| ||||||||||| Sbjct 11951 AGTCTTACCAGTTAAAGTTTTAACAAAAATTTG 11919 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| ||||||||| || || ||||| || |||||||| || |||||| | || |||||| Sbjct 9075 AAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACA 9134 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 | || || || |||||||||||| | || |||||| Sbjct 9135 TTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGA 9169 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| ||||||||| || || ||||| || |||||||| || |||||| | || |||||| Sbjct 12037 AAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACA 12096 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 | || || || |||||||||||| | || |||||| Sbjct 12097 TTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGA 12131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178884109556294