Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2125 125 8e-24 seq229 111 2e-19 seq228 111 2e-19 >seq2125 Length=273455 Score = 125 bits (138), Expect = 8e-24 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 154872 ATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGT 154931 |||||| |||| || || || || ||||| | |||||| | | || | | | ||| Sbjct 49825 ATTATGGTTACTTATCCTTCAACTTATGGTCTGTTTGAACCAACTATAAAAGAAGCTTGT 49766 Query 154932 AAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAG 154991 |||| |||| | ||||||||||||| || || ||||| || ||| | || || || Sbjct 49765 GAGATTATTCACCAACATGGTGGTCAGGTTTACCTCGATGGTGCTAATATGAACGCTCAA 49706 Query 154992 GTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAA 155051 || || ||| || ||| |||| | ||||| || || |||||| | || ||||||||| Sbjct 49705 GTTGGTCTAACATCTCCAGGTGATTTAGGTGCTGACGTTTGTCATTTGAATTTACATAAA 49646 Query 155052 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCA 155108 || || ||||| ||||| ||||| ||||| || |||||||| || |||| ||| Sbjct 49645 ACTTTTGCCATTCCTCATGGTGGTGGTGGTCCAGGTGTAGGTCCAATTTGTGTTGCA 49589 >seq229 Length=1362 Score = 111 bits (122), Expect = 2e-19 Identities = 183/263 (70%), Gaps = 2/263 (1%) Strand=Plus/Minus Query 153202 GTCTTATA--GGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGT 153259 |||||||| ||| |||| || ||||| || | ||| | ||| || || |||| | Sbjct 382 GTCTTATATTGGTAAAGGTTATTATGGTACAAAATTACCACTAGTTATTCAAAGAAATCT 323 Query 153260 TCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGG 153319 | ||||||||| ||||| || || || || || ||||||||||| | ||||| || Sbjct 322 ATTGGAGAATCCTGCATGGTATACTTCCTATACACCTTATCAAGCTGAAGTTTCTCAAGG 263 Query 153320 AAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAAT 153379 |||||||| | || | ||||| ||||| | | | || || || || || ||||| Sbjct 262 TAGATTGGAGAGTCTACTTAATTATCAAACAGTTGTATCGGATCTGACTGGCTTGCCAAT 203 Query 153380 AGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTATTAGCATA 153439 || || || ||| ||||||| |||| | | | || |||||||| ||| | || ||| Sbjct 202 CGCCAATGCTTCTTTATTAGACGAAGGATCGTCGGCTGCAGAAGCGATGATTTTGTCATT 143 Query 153440 TAATTCTACAAGAGATAAGAAGA 153462 ||| | |||||| || |||| Sbjct 142 TAACAATTCAAGAGGCAAAAAGA 120 >seq228 Length=1362 Score = 111 bits (122), Expect = 2e-19 Identities = 183/263 (70%), Gaps = 2/263 (1%) Strand=Plus/Minus Query 153202 GTCTTATA--GGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGT 153259 |||||||| ||| |||| || ||||| || | ||| | ||| || || |||| | Sbjct 382 GTCTTATATTGGTAAAGGTTATTATGGTACAAAATTACCACTAGTTATTCAAAGAAATCT 323 Query 153260 TCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGG 153319 | ||||||||| ||||| || || || || || ||||||||||| | ||||| || Sbjct 322 ATTGGAGAATCCTGCATGGTATACTTCCTATACACCTTATCAAGCTGAAGTTTCTCAAGG 263 Query 153320 AAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAAT 153379 |||||||| | || | ||||| ||||| | | | || || || || || ||||| Sbjct 262 TAGATTGGAGAGTCTACTTAATTATCAAACAGTTGTATCGGATCTGACTGGCTTGCCAAT 203 Query 153380 AGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTATTAGCATA 153439 || || || ||| ||||||| |||| | | | || |||||||| ||| | || ||| Sbjct 202 CGCCAATGCTTCTTTATTAGACGAAGGATCGTCGGCTGCAGAAGCGATGATTTTGTCATT 143 Query 153440 TAATTCTACAAGAGATAAGAAGA 153462 ||| | |||||| || |||| Sbjct 142 TAACAATTCAAGAGGCAAAAAGA 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579194829922880