Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq2125 149 7e-31 seq229 102 1e-16 seq228 102 1e-16 >seq2125 Length=273455 Score = 149 bits (164), Expect = 7e-31 Identities = 175/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGT 159606 |||||| |||| ||||| || || ||||| | |||||| ||| || | | | ||| Sbjct 49825 ATTATGGTTACTTATCCTTCAACTTATGGTCTGTTTGAACCAACTATAAAAGAAGCTTGT 49766 Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666 ||||| |||| | ||||||||||||| || || |||||||| ||| | || || || Sbjct 49765 GAGATTATTCACCAACATGGTGGTCAGGTTTACCTCGATGGTGCTAATATGAACGCTCAA 49706 Query 159667 GTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAG 159726 || |||||| || ||| |||| | ||||| || || |||||| | || |||||||| Sbjct 49705 GTTGGTCTAACATCTCCAGGTGATTTAGGTGCTGACGTTTGTCATTTGAATTTACATAAA 49646 Query 159727 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCA 159783 || || ||||| ||||| ||||| ||||| || |||||||| ||| |||| ||| Sbjct 49645 ACTTTTGCCATTCCTCATGGTGGTGGTGGTCCAGGTGTAGGTCCAATTTGTGTTGCA 49589 >seq229 Length=1362 Score = 102 bits (112), Expect = 1e-16 Identities = 181/263 (69%), Gaps = 2/263 (1%) Strand=Plus/Minus Query 157877 GTCTTATA--GGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGT 157934 |||||||| ||| |||| || ||||| || | ||| | ||| || || |||| | Sbjct 382 GTCTTATATTGGTAAAGGTTATTATGGTACAAAATTACCACTAGTTATTCAAAGAAATCT 323 Query 157935 TCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGG 157994 | ||||||||| ||||| || || || || || ||||||||||| | ||||| || Sbjct 322 ATTGGAGAATCCTGCATGGTATACTTCCTATACACCTTATCAAGCTGAAGTTTCTCAAGG 263 Query 157995 AAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGAT 158054 |||||||| | || | ||||| ||||| | | | || || || || | || || Sbjct 262 TAGATTGGAGAGTCTACTTAATTATCAAACAGTTGTATCGGATCTGACTGGCTTGCCAAT 203 Query 158055 AGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATA 158114 || || || ||| ||||||| |||| | | | || |||||||| ||| | || ||| Sbjct 202 CGCCAATGCTTCTTTATTAGACGAAGGATCGTCGGCTGCAGAAGCGATGATTTTGTCATT 143 Query 158115 TAATTCTACAAGAGATAAGAAGA 158137 ||| | |||||| || |||| Sbjct 142 TAACAATTCAAGAGGCAAAAAGA 120 >seq228 Length=1362 Score = 102 bits (112), Expect = 1e-16 Identities = 181/263 (69%), Gaps = 2/263 (1%) Strand=Plus/Minus Query 157877 GTCTTATA--GGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGT 157934 |||||||| ||| |||| || ||||| || | ||| | ||| || || |||| | Sbjct 382 GTCTTATATTGGTAAAGGTTATTATGGTACAAAATTACCACTAGTTATTCAAAGAAATCT 323 Query 157935 TCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGG 157994 | ||||||||| ||||| || || || || || ||||||||||| | ||||| || Sbjct 322 ATTGGAGAATCCTGCATGGTATACTTCCTATACACCTTATCAAGCTGAAGTTTCTCAAGG 263 Query 157995 AAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGAT 158054 |||||||| | || | ||||| ||||| | | | || || || || | || || Sbjct 262 TAGATTGGAGAGTCTACTTAATTATCAAACAGTTGTATCGGATCTGACTGGCTTGCCAAT 203 Query 158055 AGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATA 158114 || || || ||| ||||||| |||| | | | || |||||||| ||| | || ||| Sbjct 202 CGCCAATGCTTCTTTATTAGACGAAGGATCGTCGGCTGCAGAAGCGATGATTTTGTCATT 143 Query 158115 TAATTCTACAAGAGATAAGAAGA 158137 ||| | |||||| || |||| Sbjct 142 TAACAATTCAAGAGGCAAAAAGA 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588032955711520