Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq2125 149 7e-31
seq229 102 1e-16
seq228 102 1e-16
>seq2125
Length=273455
Score = 149 bits (164), Expect = 7e-31
Identities = 175/237 (74%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGT 159606
|||||| |||| ||||| || || ||||| | |||||| ||| || | | | |||
Sbjct 49825 ATTATGGTTACTTATCCTTCAACTTATGGTCTGTTTGAACCAACTATAAAAGAAGCTTGT 49766
Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666
||||| |||| | ||||||||||||| || || |||||||| ||| | || || ||
Sbjct 49765 GAGATTATTCACCAACATGGTGGTCAGGTTTACCTCGATGGTGCTAATATGAACGCTCAA 49706
Query 159667 GTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAG 159726
|| |||||| || ||| |||| | ||||| || || |||||| | || ||||||||
Sbjct 49705 GTTGGTCTAACATCTCCAGGTGATTTAGGTGCTGACGTTTGTCATTTGAATTTACATAAA 49646
Query 159727 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCA 159783
|| || ||||| ||||| ||||| ||||| || |||||||| ||| |||| |||
Sbjct 49645 ACTTTTGCCATTCCTCATGGTGGTGGTGGTCCAGGTGTAGGTCCAATTTGTGTTGCA 49589
>seq229
Length=1362
Score = 102 bits (112), Expect = 1e-16
Identities = 181/263 (69%), Gaps = 2/263 (1%)
Strand=Plus/Minus
Query 157877 GTCTTATA--GGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGT 157934
|||||||| ||| |||| || ||||| || | ||| | ||| || || |||| |
Sbjct 382 GTCTTATATTGGTAAAGGTTATTATGGTACAAAATTACCACTAGTTATTCAAAGAAATCT 323
Query 157935 TCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGG 157994
| ||||||||| ||||| || || || || || ||||||||||| | ||||| ||
Sbjct 322 ATTGGAGAATCCTGCATGGTATACTTCCTATACACCTTATCAAGCTGAAGTTTCTCAAGG 263
Query 157995 AAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGAT 158054
|||||||| | || | ||||| ||||| | | | || || || || | || ||
Sbjct 262 TAGATTGGAGAGTCTACTTAATTATCAAACAGTTGTATCGGATCTGACTGGCTTGCCAAT 203
Query 158055 AGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATA 158114
|| || || ||| ||||||| |||| | | | || |||||||| ||| | || |||
Sbjct 202 CGCCAATGCTTCTTTATTAGACGAAGGATCGTCGGCTGCAGAAGCGATGATTTTGTCATT 143
Query 158115 TAATTCTACAAGAGATAAGAAGA 158137
||| | |||||| || ||||
Sbjct 142 TAACAATTCAAGAGGCAAAAAGA 120
>seq228
Length=1362
Score = 102 bits (112), Expect = 1e-16
Identities = 181/263 (69%), Gaps = 2/263 (1%)
Strand=Plus/Minus
Query 157877 GTCTTATA--GGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGT 157934
|||||||| ||| |||| || ||||| || | ||| | ||| || || |||| |
Sbjct 382 GTCTTATATTGGTAAAGGTTATTATGGTACAAAATTACCACTAGTTATTCAAAGAAATCT 323
Query 157935 TCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGG 157994
| ||||||||| ||||| || || || || || ||||||||||| | ||||| ||
Sbjct 322 ATTGGAGAATCCTGCATGGTATACTTCCTATACACCTTATCAAGCTGAAGTTTCTCAAGG 263
Query 157995 AAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGAT 158054
|||||||| | || | ||||| ||||| | | | || || || || | || ||
Sbjct 262 TAGATTGGAGAGTCTACTTAATTATCAAACAGTTGTATCGGATCTGACTGGCTTGCCAAT 203
Query 158055 AGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATA 158114
|| || || ||| ||||||| |||| | | | || |||||||| ||| | || |||
Sbjct 202 CGCCAATGCTTCTTTATTAGACGAAGGATCGTCGGCTGCAGAAGCGATGATTTTGTCATT 143
Query 158115 TAATTCTACAAGAGATAAGAAGA 158137
||| | |||||| || ||||
Sbjct 142 TAACAATTCAAGAGGCAAAAAGA 120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588032955711520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |