Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2119 306 4e-78 >seq2119 Length=607893 Score = 306 bits (338), Expect = 4e-78 Identities = 593/866 (68%), Gaps = 17/866 (2%) Strand=Plus/Minus Query 36907 TTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCATAAAATCAAATGGATTAG 36966 |||||||||| ||||| || || | || || || || |||||||| || |||||||| | Sbjct 161080 TTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAATGGATTTG 161021 Query 36967 --ATGTATTATATATAGTACTACATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTC 37024 | || |||| | | |||| |||| | |||| || ||||| |||||||| || Sbjct 161020 TAACGTCGTATACCTTTTC--ACATCCTAATGCAATCAGTAGTCTATCTGCAACAAACTC 160963 Query 37025 TATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-T 37083 | || | |||||| | || | || ||||| | | || || || | || || | Sbjct 160962 GACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGGCGTCAGT 160903 Query 37084 GAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATAT---TAACAATAACTTCTT 37140 |||| | | |||| | || || || || ||| || | | ||||| ||| | Sbjct 160902 GAAGTATTTCTTTT-CAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTTTTTCGT 160844 Query 37141 CAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTT 37200 | ||||| || || |||| | ||| | ||||| |||||||| ||||||||||| Sbjct 160843 C---TGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAACCTT 160787 Query 37201 CATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAA 37260 ||||||||| |||| || || || || || || |||||||| |||||||| ||||| | Sbjct 160786 CATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCA 160727 Query 37261 TCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTA 37320 ||| || || | |||||| || ||||| ||||||||||||||||| || |||||||| | Sbjct 160726 ACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCA 160667 Query 37321 CAAGACG-TGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCC 37379 | | | | | | | | | || || || | |||||||||| | ||| || ||| Sbjct 160666 CCAACCTCTCTGCAAACAACGCATCTTTA-TCTGCAATCCATTTTAAGGCCCATTCGGCC 160608 Query 37380 TTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTA 37439 ||| || | |||| |||||||||||||| || || | || | |||| | | Sbjct 160607 TTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTGGA 160548 Query 37440 TCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCT 37499 ||| | || ||||||||||| | |||| ||| |||| || ||||| ||||| || Sbjct 160547 TCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCATA 160488 Query 37500 ATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTA 37559 || || || ||||| ||||| |||| || | | ||||||||| | | || ||| | Sbjct 160487 ATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTCTCA 160428 Query 37560 GCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATA 37619 |||| |||||||| ||||| |||||| ||| |||||||| || ||||| | || Sbjct 160427 ACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATG 160368 Query 37620 AAATGTCTTTCA---TCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCA 37676 || ||||||| || || || || |||||||||| | |||||| || | |||| Sbjct 160367 AAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCA 160308 Query 37677 ACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTA 37736 | ||| || | ||||| ||| ||| ||| || ||||| |||||| || | | Sbjct 160307 ATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGA 160248 Query 37737 TGTTGTATTGGAAATATTACAAATCT 37762 | | |||||||| | ||||| || Sbjct 160247 TACTTGATTGGAAAGAGAACAAACCT 160222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592298423371280