Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2119 215 3e-51 seq2138 170 1e-37 >seq2119 Length=607893 Score = 215 bits (238), Expect = 3e-51 Identities = 362/517 (70%), Gaps = 14/517 (3%) Strand=Plus/Minus Query 25896 AGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACA 25955 |||| ||| |||||| |||||| ||||||| | |||||||||||||| |||||||| | Sbjct 505175 AGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATA 505116 Query 25956 TTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTA 26015 ||| ||||||||||| ||||| ||||||||||| ||||| || || | | ||| | Sbjct 505115 AAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAA 505056 Query 26016 AGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTT 26075 ||||||| ||||||||| ||||| || || | ||| | ||||| ||| ||||| Sbjct 505055 TAAAATCAAGAATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTT 504996 Query 26076 TTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTA 26135 | |||||||| || || || |||||||| | ||| || || | | |||||||| || Sbjct 504995 TATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAA-TA 504937 Query 26136 ATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGA 26194 |||| ||| | | || || || | ||| | || || || |||||||||| || Sbjct 504936 ATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGT 504877 Query 26195 GCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCG 26254 ||| | || || |||||||| ||| ||||| ||||| ||| | ||||| Sbjct 504876 ATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCA 504817 Query 26255 AAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAA 26314 | || |||| ||| ||| | |||||| | | ||| ||||| ||||| | ||| | Sbjct 504816 TAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTG---A 504760 Query 26315 TGAGTT---GTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATA--TCCTTCAC 26369 | || || || ||||| || | || || | |||||| || |||| || || || Sbjct 504759 TTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGAC 504700 Query 26370 -TCAAAGCTGTATAAGTTTCAAGAACTTCATCGATAT 26405 ||||| |||||||||||| ||| ||| |||| Sbjct 504699 ATCAAA---TTATAAGTTTCAATAACAGAATCAATAT 504666 >seq2138 Length=166447 Score = 170 bits (188), Expect = 1e-37 Identities = 192/252 (76%), Gaps = 4/252 (2%) Strand=Plus/Plus Query 25898 AATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATT 25957 |||||| |||||| ||| | || ||||||||||| || | |||||||||||| | Sbjct 15145 AATAAACACCAATCTTCATCTCTTTCCACTTTCTCCATGAACATATCTGGAATCCATAGA 15204 Query 25958 GCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAG 26017 ||| |||||||||||| |||||||||||||| || || |||||||| | | || | || Sbjct 15205 GCAATAAATAAATCTCTAGCTCTCATTTCTTCCTTCCCATGATTCTTCCTGATAT-TGAG 15263 Query 26018 AAA-TCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA-CTACCTTTTCTTT 26075 ||| ||||||| ||| |||||||| |||||||| || |||||| |||| ||||| Sbjct 15264 AAAGTCAAAAACATCACCATGCCATGGCTCTAAATATAT-GCAAAATGCACCTGGTCTTT 15322 Query 26076 TTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTA 26135 | |||||| || || || ||| ||||||| |||||| ||||| ||||| || | || Sbjct 15323 TGTTTCCACCCTGGTCAACATATTGTGCAGTTGAATTGAATACTTTTAACATAGGGATTA 15382 Query 26136 ATCCAGTTGAAA 26147 | || | ||||| Sbjct 15383 AACCGGATGAAA 15394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253032345698150