Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq2125 158 1e-33
seq229 107 2e-18
seq228 107 2e-18
>seq2125
Length=273455
Score = 158 bits (174), Expect = 1e-33
Identities = 177/237 (75%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 138179 TGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTT 138238
||| |||| ||| |||||||| || ||||| ||||| ||||| ||||| || || ||
Sbjct 49589 TGCAACACAAATTGGACCTACACCTGGACCACCACCACCATGAGGAATGGCAAAAGTTTT 49648
Query 138239 ATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTG 138298
||||||||| | |||||| || || ||||| | |||| ||| || |||||| || ||
Sbjct 49649 ATGTAAATTCAAATGACAAACGTCAGCACCTAAATCACCTGGAGATGTTAGACCAACTTG 49708
Query 138299 TGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACA 138358
|| || | ||| ||||||||||| || ||||||||||||| | |||| |||| |||
Sbjct 49709 AGCGTTCATATTAGCACCATCGAGGTAAACCTGACCACCATGTTGGTGAATAATCTCACA 49768
Query 138359 TATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415
| | | || ||| |||||| | ||||| ||| || ||||| |||| ||||||
Sbjct 49769 AGCTTCTTTTATAGTTGGTTCAAACAGACCATAAGTTGAAGGATAAGTAACCATAAT 49825
>seq229
Length=1362
Score = 107 bits (118), Expect = 2e-18
Identities = 182/263 (69%), Gaps = 2/263 (1%)
Strand=Plus/Plus
Query 139825 TCTTCTTATCTCTTGTAGAATTATATGCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTT 139884
|||| || |||||| | ||| ||| || | ||| || ||||| || | | | |||
Sbjct 120 TCTTTTTGCCTCTTGAATTGTTAAATGACAAAATCATCGCTTCTGCAGCCGACGATCCTT 179
Query 139885 CATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGT 139944
| ||||||| ||| || || || ||||| || || || || || | | | ||||| |
Sbjct 180 CGTCTAATAAAGAAGCATTGGCGATTGGCAAGCCAGTCAGATCCGATACAACTGTTTGAT 239
Query 139945 AATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAAGATG 140004
|||| | || | |||||||| || ||||| | ||||||||||| || || || || |
Sbjct 240 AATTAAGTAGACTCTCCAATCTACCTTGAGAAACTTCAGCTTGATAAGGTGTATAGGAAG 299
Query 140005 TGTACCAACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGGGTGTAATGGTTCCAT 140064
| ||||| ||||||||| | | |||| || || ||| | ||| | || ||||
Sbjct 300 TATACCATGCAGGATTCTCCAATAGATTTCTTTGAATAACTAGTGGTAATTTTGTACCAT 359
Query 140065 AGTATCCTTGACC--TATAAGAC 140085
| || |||| ||| ||||||||
Sbjct 360 AATAACCTTTACCAATATAAGAC 382
>seq228
Length=1362
Score = 107 bits (118), Expect = 2e-18
Identities = 182/263 (69%), Gaps = 2/263 (1%)
Strand=Plus/Plus
Query 139825 TCTTCTTATCTCTTGTAGAATTATATGCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTT 139884
|||| || |||||| | ||| ||| || | ||| || ||||| || | | | |||
Sbjct 120 TCTTTTTGCCTCTTGAATTGTTAAATGACAAAATCATCGCTTCTGCAGCCGACGATCCTT 179
Query 139885 CATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGT 139944
| ||||||| ||| || || || ||||| || || || || || | | | ||||| |
Sbjct 180 CGTCTAATAAAGAAGCATTGGCGATTGGCAAGCCAGTCAGATCCGATACAACTGTTTGAT 239
Query 139945 AATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAAGATG 140004
|||| | || | |||||||| || ||||| | ||||||||||| || || || || |
Sbjct 240 AATTAAGTAGACTCTCCAATCTACCTTGAGAAACTTCAGCTTGATAAGGTGTATAGGAAG 299
Query 140005 TGTACCAACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGGGTGTAATGGTTCCAT 140064
| ||||| ||||||||| | | |||| || || ||| | ||| | || ||||
Sbjct 300 TATACCATGCAGGATTCTCCAATAGATTTCTTTGAATAACTAGTGGTAATTTTGTACCAT 359
Query 140065 AGTATCCTTGACC--TATAAGAC 140085
| || |||| ||| ||||||||
Sbjct 360 AATAACCTTTACCAATATAAGAC 382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578980436574640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |