Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq2125 158 1e-33 seq229 107 2e-18 seq228 107 2e-18 >seq2125 Length=273455 Score = 158 bits (174), Expect = 1e-33 Identities = 177/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 138179 TGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTT 138238 ||| |||| ||| |||||||| || ||||| ||||| ||||| ||||| || || || Sbjct 49589 TGCAACACAAATTGGACCTACACCTGGACCACCACCACCATGAGGAATGGCAAAAGTTTT 49648 Query 138239 ATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTG 138298 ||||||||| | |||||| || || ||||| | |||| ||| || |||||| || || Sbjct 49649 ATGTAAATTCAAATGACAAACGTCAGCACCTAAATCACCTGGAGATGTTAGACCAACTTG 49708 Query 138299 TGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACA 138358 || || | ||| ||||||||||| || ||||||||||||| | |||| |||| ||| Sbjct 49709 AGCGTTCATATTAGCACCATCGAGGTAAACCTGACCACCATGTTGGTGAATAATCTCACA 49768 Query 138359 TATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415 | | | || ||| |||||| | ||||| ||| || ||||| |||| |||||| Sbjct 49769 AGCTTCTTTTATAGTTGGTTCAAACAGACCATAAGTTGAAGGATAAGTAACCATAAT 49825 >seq229 Length=1362 Score = 107 bits (118), Expect = 2e-18 Identities = 182/263 (69%), Gaps = 2/263 (1%) Strand=Plus/Plus Query 139825 TCTTCTTATCTCTTGTAGAATTATATGCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTT 139884 |||| || |||||| | ||| ||| || | ||| || ||||| || | | | ||| Sbjct 120 TCTTTTTGCCTCTTGAATTGTTAAATGACAAAATCATCGCTTCTGCAGCCGACGATCCTT 179 Query 139885 CATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGT 139944 | ||||||| ||| || || || ||||| || || || || || | | | ||||| | Sbjct 180 CGTCTAATAAAGAAGCATTGGCGATTGGCAAGCCAGTCAGATCCGATACAACTGTTTGAT 239 Query 139945 AATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAAGATG 140004 |||| | || | |||||||| || ||||| | ||||||||||| || || || || | Sbjct 240 AATTAAGTAGACTCTCCAATCTACCTTGAGAAACTTCAGCTTGATAAGGTGTATAGGAAG 299 Query 140005 TGTACCAACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGGGTGTAATGGTTCCAT 140064 | ||||| ||||||||| | | |||| || || ||| | ||| | || |||| Sbjct 300 TATACCATGCAGGATTCTCCAATAGATTTCTTTGAATAACTAGTGGTAATTTTGTACCAT 359 Query 140065 AGTATCCTTGACC--TATAAGAC 140085 | || |||| ||| |||||||| Sbjct 360 AATAACCTTTACCAATATAAGAC 382 >seq228 Length=1362 Score = 107 bits (118), Expect = 2e-18 Identities = 182/263 (69%), Gaps = 2/263 (1%) Strand=Plus/Plus Query 139825 TCTTCTTATCTCTTGTAGAATTATATGCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTT 139884 |||| || |||||| | ||| ||| || | ||| || ||||| || | | | ||| Sbjct 120 TCTTTTTGCCTCTTGAATTGTTAAATGACAAAATCATCGCTTCTGCAGCCGACGATCCTT 179 Query 139885 CATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGT 139944 | ||||||| ||| || || || ||||| || || || || || | | | ||||| | Sbjct 180 CGTCTAATAAAGAAGCATTGGCGATTGGCAAGCCAGTCAGATCCGATACAACTGTTTGAT 239 Query 139945 AATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAAGATG 140004 |||| | || | |||||||| || ||||| | ||||||||||| || || || || | Sbjct 240 AATTAAGTAGACTCTCCAATCTACCTTGAGAAACTTCAGCTTGATAAGGTGTATAGGAAG 299 Query 140005 TGTACCAACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGGGTGTAATGGTTCCAT 140064 | ||||| ||||||||| | | |||| || || ||| | ||| | || |||| Sbjct 300 TATACCATGCAGGATTCTCCAATAGATTTCTTTGAATAACTAGTGGTAATTTTGTACCAT 359 Query 140065 AGTATCCTTGACC--TATAAGAC 140085 | || |||| ||| |||||||| Sbjct 360 AATAACCTTTACCAATATAAGAC 382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578980436574640