Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2119 255 7e-63 seq2159 89.7 6e-13 >seq2119 Length=607893 Score = 255 bits (282), Expect = 7e-63 Identities = 913/1407 (65%), Gaps = 33/1407 (2%) Strand=Plus/Plus Query 75242 GGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGG 75300 || || || || || || ||||||||||| | || || || | |||||| | ||| Sbjct 504650 GGTATTCATGGTGATGATATTGATTCTGTTATTGAAACTTATAATTTGATGTCAAAGAGG 504709 Query 75301 TATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTC 75360 ||| |||| || || | ||||| || |||||| | ||||| |||||| || ||||| Sbjct 504710 TAT-TTCACACATGCTTCTCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTC 504768 Query 75361 CAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTAC 75420 || ||| | | || | ||||| || || || | |||||||||| ||| | | Sbjct 504769 TTCATGTTTCTTAGTTGCAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAA 504828 Query 75421 GGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAG 75480 || ||||| || || || ||||| ||||||||| | || || ||| || | || Sbjct 504829 AGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAG 504888 Query 75481 AGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCT 75540 | | | | ||| |||| || || |||||| ||| |||| |||||||||||| | Sbjct 504889 ATCAACTGGTTCTTATATTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGAT 504948 Query 75541 TCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAGG---GGTC 75597 | | || ||||| ||| || | ||||| | |||| || | ||| ||| Sbjct 504949 TAGGGTCTTTAATAACACTGCAAGGTATGTTGACCAAGGTGGTAATAA-AAGACCTGGTG 505007 Query 75598 CATC-GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGAC 75656 | | || | || | || || |||||| | ||||| | || || |||| | | Sbjct 505008 CGTTTGCACTATATATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGA 505067 Query 75657 TCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAG 75716 ||||| ||| | ||||| | | |||||| | || | | | |||||||| | Sbjct 505068 AAAACCACGGTAAAGAAGAAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTG 505127 Query 75717 ACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCC-AGACAAG 75775 | | || ||| | | |||||| | || | ||| || | |||| || || ||| Sbjct 505128 ATTTATTTATGGAAAGAGTTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAG 505187 Query 75776 GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAA 75835 |||| ||| | || | ||||| || || ||| | || || || |||||| Sbjct 505188 -CACCTGGTTTGAGTGATGTATATGGTGATGAATTCAAAGAATTATATACCAAATATGAA 505246 Query 75836 GAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAA 75894 || ||||||| || || | ||| | | ||| ||| | | || | | Sbjct 505247 AGAGAAGGTAGAGGCAGGAGAACAATTAAAGCA-CAAAAGTTATGGTATTCGATCTTAGA 505305 Query 75895 ATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAG 75954 | | || || || ||||| ||||| | ||| | || |||||||| ||||||||||| Sbjct 505306 AGCTCAAACTGAAACTGGTACACCTTTCATGTTATATAAGGATGCATGTAACAAGAAATC 505365 Query 75955 TAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTA 76014 ||| ||| | |||||||| ||||| || ||| | ||| |||||| | || || Sbjct 505366 TAATCAACAAAATTTGGGTGTTATCAAATCTTCCAATTTATGCTGTGAAATTGTTGAATA 505425 Query 76015 CACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT 76074 || || || || || ||||| ||||| || | || | || | ||| Sbjct 505426 TTCATCACCTGAGGAAACAGCAGTTTGTAATTTAGCTAGTGTTGCATTGCCTGCATTTGT 505485 Query 76075 CAATGAA---GA-GACTCGCACTTTTGAT-----TATGAAAAACTTCATGAAATCACAAA 76125 |||| || ||| | ||| ||| | | ||| || | |||||||| ||||| Sbjct 505486 ---TGAAAGTGATGACAAGAACTGTTGGTATAACTTTGAGAAGTTACATGAAATTACAAA 505542 Query 76126 GATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGC 76185 | |||| || ||||| | || | |||| || ||||| | ||||| ||||| ||||| Sbjct 505543 GGTTGTGACTAAAAACTTGAATAAAATCATCGATAGAAACTACTATCCTGTTGAAACTGC 505602 Query 76186 GCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGT 76245 | | || |||||| || ||||||| |||| | | ||||| |||||| | || |||| Sbjct 505603 AAGGAGATCAAATATGAGAAACAGACCAATTGCTGTTGGTGTCCAAGGTTTGGCAGATGC 505662 Query 76246 ATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTAT 76305 || || ||| | | |||||||||| ||||| ||||| ||||| || || Sbjct 505663 CTTCATGATGTTGAGATTACCATTTGATTCGCCAGAAGCAAAGGAACTGAATATTCAAAT 505722 Query 76306 CTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGG 76365 ||||||||||| ||||| || | ||||||| ||| |||||| || | || Sbjct 505723 TTTTGAAACCATTTATCATGCTGCTTTGGAGGCAAGTGTTGAATTATCTATTAGGGATGG 505782 Query 76366 TTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTG 76425 | |||||||| ||||| || ||||| || |||||||| | || ||||||||| | || Sbjct 505783 ACCATATGAGACTTTTGAAGGATCTCCTGCATCCCAAGGTCTCCTACAGTTTGATCTTTG 505842 Query 76426 GG--AAGGTG-AAACCAAGCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGA 76482 || ||| | |||||| || | || ||||||||| | ||||| ||||||| Sbjct 505843 GGGTAAGAAGCCAACCAA-CTTA--TATGACTGGGATTCATTAAAGGAGAAAATCAAGGC 505899 Query 76483 GAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAA 76540 || || || | | | || || | | ||||||||||| || || || || | ||| Sbjct 505900 CAATGG--TTTGAGAAATTCATTGCTTGTTGCACCAATGCCGACTGCTTCAACATCTCAA 505957 Query 76541 ATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACC 76600 || | ||| | || |||||||||||||| ||||| | || || ||| |||||| Sbjct 505958 ATTCTAGGTTACAACGAATGCTTTGAACCTTACACTTCCAATATTTACTCTAGAAGAGTT 506017 Query 76601 CTCGCAGGTGAGTTTGTCATTGTCAAC 76627 | || ||||| || ||||||||| Sbjct 506018 TTAGCCGGTGAATTCCAGATTGTCAAC 506044 >seq2159 Length=100225 Score = 89.7 bits (98), Expect = 6e-13 Identities = 271/414 (65%), Gaps = 5/414 (1%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || || |||||||| ||||| || || | ||| || ||||| || || || | Sbjct 49630 GGCGCAAAGATCCCTCGAGGTGCTATTTTAAATGGTCCACCCGGTACAGGTAAAACGTTA 49571 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAA 175394 || || ||||| || |||||| || || || ||| | | || |||| | | Sbjct 49570 CTTGCTAAAGCCACTGCTGGTGAAGCAGGGGTTCCGTTCTACTCTGTT-TCTGGTTCTGA 49512 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 |||||||| |||||||||||||| ||||| | | ||||| || | || | | || Sbjct 49511 ATTTGTGGAAATGTTTGTTGGTGTTGGTGCGTCACGTGTTCGTGAGTTGTTCAAGACTGC 49452 Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAA--GCA- 175511 | |||||| ||||| |||||| ||| ||||||| || ||||| | || || || Sbjct 49451 AAGAGAAAATGCACCATCTATTGTTTTCGTTGATGAAATCGATGCTATCGGAAAATCCAG 49392 Query 175512 ACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACT 175571 | | | | | |||||| || ||||| || |||||| | || | ||||| || || Sbjct 49391 AGGAAAGGGAAGAGGTATGGGAGGTAATGATGAAAGAGAAAACACCTTAAATCAGCTTCT 49332 Query 175572 CACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCG 175631 ||| |||||||| ||| | ||| | |||| ||| |||| | |||||||| Sbjct 49331 AGTCGAAATGGATGGATTTAAGTCTGACGATCATGTTGTTGTTTTTGCAGGTACTAATCG 49272 Query 175632 CGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCGCAAGAT 175685 || || | | || || | || | |||||| | |||||||| || || Sbjct 49271 TGTTGACGTTTTGGACCCAGCTTTGCTAAGACCGGGTAGATTTGATCGTAAAAT 49218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596551091428160