Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq2119 284 2e-71
seq2206 154 2e-32
seq2142 127 3e-24
>seq2119
Length=607893
Score = 284 bits (314), Expect = 2e-71
Identities = 600/885 (68%), Gaps = 26/885 (3%)
Strand=Plus/Minus
Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920
|| |||| ||| || |||| | || ||||| || ||||| || || | | || ||
Sbjct 161105 GCCTTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATG 161046
Query 17921 AAATTCATAAAATCAAATGGATTAGTG--GTTTTATAATATTTTTCTTGTATTAATTCGT 17978
| |||||| || |||||||| || || |||| ||||| | |||| |
Sbjct 161045 TTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACC--TTTTCACATCCTAATGCAA 160988
Query 17979 ATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTA 18038
| || ||||||||| ||||| |||||||| || |||||||||| ||||||||| |
Sbjct 160987 TCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGA 160928
Query 18039 GTAGTCTGAAAGGTAGAGCATCAAT-AATAAATTCTTTCTCTATCTCAACAGACTCTTTT 18097
| | ||| |||||| || ||| | || | |||||| || || ||||| | || |
Sbjct 160927 GCAAGTTGACAGGTAGGGCGTCAGTGAAGTATTTCTTT-TCAATATCAACGGCTTCGGTA 160869
Query 18098 ATTATGTTTATTACCCTAGATT----TTGGCAATTTATTAATTATGTGATTATAATATAA 18153
|| || | | | || | || | || || | || |||||| | | |
Sbjct 160868 ATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAA--ATGTGA-----AAAGAG 160816
Query 18154 TAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGT 18213
||||| |||||||| || ||||||||||||||||| | || | ||||| |||||
Sbjct 160815 CAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGT 160756
Query 18214 TAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAA 18273
|| || ||||| | |||||| ||||| | ||| || || ||||| || || ||| ||
Sbjct 160755 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAA 160696
Query 18274 GAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTATTTATTG 18331
||| ||||| ||||| ||| || || || | || || || ||||| | | || | |
Sbjct 160695 GAAAATACCTTCAACAGCA-GCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTTAT 160637
Query 18332 CT-CAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTAT 18390
|| || ||||||||| |||||||| | | ||||| || || | || ||
Sbjct 160636 CTGCA--ATCCATTTTAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAAT 160579
Query 18391 AGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGA 18450
||||| || || || |||| || | |||||| || ||||| || || || |||||
Sbjct 160578 TGCATTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGA 160519
Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTC 18510
||| |||| ||||| ||| ||||||| || || || | ||| || || |||||||
Sbjct 160518 ATAAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTC 160459
Query 18511 GGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGC 18570
||| ||||| || || | || | || || ||||| ||||| |||||||| ||||
Sbjct 160458 TGGAATTTGAACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGA 160399
Query 18571 AGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATT 18627
|| || || || || | ||| | |||||| | ||||||| || || | |||
Sbjct 160398 AGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATT 160339
Query 18628 GTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTC 18687
|||||| |||| | |||||| || ||||||| ||| |||| ||||| ||||||| |||
Sbjct 160338 GTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTC 160279
Query 18688 GGCCTGTTTGTACATTTTATAAATATCTTCATGTTGTATAGGAAA 18732
|||| |||||||||| |||| || | || | || |||||
Sbjct 160278 TGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAA 160234
>seq2206
Length=14499
Score = 154 bits (170), Expect = 2e-32
Identities = 176/234 (75%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 155819 TAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGA 155878
||| |||||||| ||| ||||||| || ||||| || |||||||| |||||||||||
Sbjct 8950 TAAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTC 9009
Query 155879 TTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGA 155938
||||| | ||| || || || |||||| ||||| || ||||| || || || ||
Sbjct 9010 ATCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGA 9069
Query 155939 ACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTA 155998
||||||||| | || | ||| |||||||| | |||||| |||||||| || || ||
Sbjct 9070 CCAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTA 9129
Query 155999 TAATATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
|| || || ||| || | || ||||| ||||| || ||||||||||| ||||
Sbjct 9130 CAACAT-TCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGGTG 9182
Score = 154 bits (170), Expect = 2e-32
Identities = 176/234 (75%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 155819 TAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGA 155878
||| |||||||| ||| ||||||| || ||||| || |||||||| |||||||||||
Sbjct 11912 TAAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTC 11971
Query 155879 TTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGA 155938
||||| | ||| || || || |||||| ||||| || ||||| || || || ||
Sbjct 11972 ATCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGA 12031
Query 155939 ACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTA 155998
||||||||| | || | ||| |||||||| | |||||| |||||||| || || ||
Sbjct 12032 CCAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTA 12091
Query 155999 TAATATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
|| || || ||| || | || ||||| ||||| || ||||||||||| ||||
Sbjct 12092 CAACAT-TCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGGTG 12144
>seq2142
Length=155211
Score = 127 bits (140), Expect = 3e-24
Identities = 169/233 (73%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| ||| | || || || || || || || ||||| |||||||| ||| |
Sbjct 147538 AAGATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCT 147597
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | || || || || | || || |||||||| ||||| || || || ||
Sbjct 147598 TCTGACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGAC 147657
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
||||||||| | || | ||| |||||||| | |||||| ||||||||||| || ||
Sbjct 147658 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTAC 147717
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| | ||||||| || | || ||||| || || || ||||| ||||| |||
Sbjct 147718 A--ACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGT 147768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731849293671200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |