Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq2119 284 2e-71 seq2206 154 2e-32 seq2142 127 3e-24 >seq2119 Length=607893 Score = 284 bits (314), Expect = 2e-71 Identities = 600/885 (68%), Gaps = 26/885 (3%) Strand=Plus/Minus Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920 || |||| ||| || |||| | || ||||| || ||||| || || | | || || Sbjct 161105 GCCTTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATG 161046 Query 17921 AAATTCATAAAATCAAATGGATTAGTG--GTTTTATAATATTTTTCTTGTATTAATTCGT 17978 | |||||| || |||||||| || || |||| ||||| | |||| | Sbjct 161045 TTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACC--TTTTCACATCCTAATGCAA 160988 Query 17979 ATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTA 18038 | || ||||||||| ||||| |||||||| || |||||||||| ||||||||| | Sbjct 160987 TCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGA 160928 Query 18039 GTAGTCTGAAAGGTAGAGCATCAAT-AATAAATTCTTTCTCTATCTCAACAGACTCTTTT 18097 | | ||| |||||| || ||| | || | |||||| || || ||||| | || | Sbjct 160927 GCAAGTTGACAGGTAGGGCGTCAGTGAAGTATTTCTTT-TCAATATCAACGGCTTCGGTA 160869 Query 18098 ATTATGTTTATTACCCTAGATT----TTGGCAATTTATTAATTATGTGATTATAATATAA 18153 || || | | | || | || | || || | || |||||| | | | Sbjct 160868 ATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAA--ATGTGA-----AAAGAG 160816 Query 18154 TAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGT 18213 ||||| |||||||| || ||||||||||||||||| | || | ||||| ||||| Sbjct 160815 CAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGT 160756 Query 18214 TAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAA 18273 || || ||||| | |||||| ||||| | ||| || || ||||| || || ||| || Sbjct 160755 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAA 160696 Query 18274 GAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTATTTATTG 18331 ||| ||||| ||||| ||| || || || | || || || ||||| | | || | | Sbjct 160695 GAAAATACCTTCAACAGCA-GCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTTAT 160637 Query 18332 CT-CAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTAT 18390 || || ||||||||| |||||||| | | ||||| || || | || || Sbjct 160636 CTGCA--ATCCATTTTAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAAT 160579 Query 18391 AGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGA 18450 ||||| || || || |||| || | |||||| || ||||| || || || ||||| Sbjct 160578 TGCATTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGA 160519 Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTC 18510 ||| |||| ||||| ||| ||||||| || || || | ||| || || ||||||| Sbjct 160518 ATAAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTC 160459 Query 18511 GGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGC 18570 ||| ||||| || || | || | || || ||||| ||||| |||||||| |||| Sbjct 160458 TGGAATTTGAACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGA 160399 Query 18571 AGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATT 18627 || || || || || | ||| | |||||| | ||||||| || || | ||| Sbjct 160398 AGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATT 160339 Query 18628 GTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTC 18687 |||||| |||| | |||||| || ||||||| ||| |||| ||||| ||||||| ||| Sbjct 160338 GTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTC 160279 Query 18688 GGCCTGTTTGTACATTTTATAAATATCTTCATGTTGTATAGGAAA 18732 |||| |||||||||| |||| || | || | || ||||| Sbjct 160278 TGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAA 160234 >seq2206 Length=14499 Score = 154 bits (170), Expect = 2e-32 Identities = 176/234 (75%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 155819 TAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGA 155878 ||| |||||||| ||| ||||||| || ||||| || |||||||| ||||||||||| Sbjct 8950 TAAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTC 9009 Query 155879 TTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGA 155938 ||||| | ||| || || || |||||| ||||| || ||||| || || || || Sbjct 9010 ATCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGA 9069 Query 155939 ACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTA 155998 ||||||||| | || | ||| |||||||| | |||||| |||||||| || || || Sbjct 9070 CCAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTA 9129 Query 155999 TAATATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 || || || ||| || | || ||||| ||||| || ||||||||||| |||| Sbjct 9130 CAACAT-TCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGGTG 9182 Score = 154 bits (170), Expect = 2e-32 Identities = 176/234 (75%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 155819 TAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGA 155878 ||| |||||||| ||| ||||||| || ||||| || |||||||| ||||||||||| Sbjct 11912 TAAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTC 11971 Query 155879 TTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGA 155938 ||||| | ||| || || || |||||| ||||| || ||||| || || || || Sbjct 11972 ATCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGA 12031 Query 155939 ACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTA 155998 ||||||||| | || | ||| |||||||| | |||||| |||||||| || || || Sbjct 12032 CCAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTA 12091 Query 155999 TAATATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 || || || ||| || | || ||||| ||||| || ||||||||||| |||| Sbjct 12092 CAACAT-TCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGGTG 12144 >seq2142 Length=155211 Score = 127 bits (140), Expect = 3e-24 Identities = 169/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || |||||||| ||| | || || || || || || || ||||| |||||||| ||| | Sbjct 147538 AAGATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCT 147597 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||| | || || || || | || || |||||||| ||||| || || || || Sbjct 147598 TCTGACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGAC 147657 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 ||||||||| | || | ||| |||||||| | |||||| ||||||||||| || || Sbjct 147658 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTAC 147717 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | | ||||||| || | || ||||| || || || ||||| ||||| ||| Sbjct 147718 A--ACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGT 147768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731849293671200