Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq2142 122 7e-23 seq2206 105 5e-18 >seq2142 Length=155211 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||||||||||||||| || ||||| || || ||||||||| | ||| || || Sbjct 147538 AAGATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCT 147597 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || || ||| | | || || |||||||| ||||| ||||| | || || Sbjct 147598 TCTGACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGAC 147657 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || |||||||| | ||| ||||| || | || || | | ||| | | |||||| Sbjct 147658 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTAC 147717 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| |||||||| ||||| | ||| |||| ||||||||| |||| || Sbjct 147718 AACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 147767 >seq2206 Length=14499 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 107552 TAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGC 107611 ||| |||||||||||||| ||||||||||| || || || |||||| | ||| ||| | Sbjct 8950 TAAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTC 9009 Query 107612 TGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGA 107671 || ||| ||| | | || || || || || || ||||| | || || Sbjct 9010 ATCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGA 9069 Query 107672 TCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTA 107731 || || |||||||| | ||| ||||| || | || || | | ||| || | ||||| Sbjct 9070 CCAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTA 9129 Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||||||||| ||||| | ||| | || |||||||| |||| || Sbjct 9130 CAACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 9180 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 107552 TAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGC 107611 ||| |||||||||||||| ||||||||||| || || || |||||| | ||| ||| | Sbjct 11912 TAAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTC 11971 Query 107612 TGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGA 107671 || ||| ||| | | || || || || || || ||||| | || || Sbjct 11972 ATCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGA 12031 Query 107672 TCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTA 107731 || || |||||||| | ||| ||||| || | || || | | ||| || | ||||| Sbjct 12032 CCAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTA 12091 Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||||||||| ||||| | ||| | || |||||||| |||| || Sbjct 12092 CAACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 12142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398864734226098