Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq2142 179 7e-40 seq2206 159 7e-34 seq2121 87.8 4e-12 >seq2142 Length=155211 Score = 179 bits (198), Expect = 7e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || || ||||| || |||||||| || || || || || || | Sbjct 147769 TACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGG 147710 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | ||||||| ||||||| ||| || || |||||||| ||||||||||| || || | Sbjct 147709 ATAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTG 147650 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||||||||| |||||| || ||||| || || || ||| || ||| | Sbjct 147649 GAATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAA 147590 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || || ||||| || || || ||||| ||||| || ||||| Sbjct 147589 CTTCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCAT 147541 >seq2206 Length=14499 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| || | || |||||||| ||||||||||| || || || || || ||||| Sbjct 9181 ACCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGA 9122 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | ||||||| ||||||| ||| || || |||||||| ||||||||||| || || || Sbjct 9121 CAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGG 9062 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| ||||| || || | || ||||| || || || ||| | || || Sbjct 9061 AATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGAC 9002 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| || || || ||||| || || || || || ||||| || ||||| Sbjct 9001 TTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 8954 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| || | || |||||||| ||||||||||| || || || || || ||||| Sbjct 12143 ACCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGA 12084 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | ||||||| ||||||| ||| || || |||||||| ||||||||||| || || || Sbjct 12083 CAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGG 12024 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| ||||| || || | || ||||| || || || ||| | || || Sbjct 12023 AATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGAC 11964 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| || || || ||||| || || || || || ||||| || ||||| Sbjct 11963 TTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 11916 >seq2121 Length=385940 Score = 87.8 bits (96), Expect = 4e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 143933 TATTCCTATTTATACAGATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCAGT 143992 ||||| ||||| | |||| ||||| |||| | ||||||| | | ||||| || Sbjct 355939 TATTCATATTTGGAAAGATGTTGATGAATGGAGTTCTTGGAATCTCAGGACAGATCCTGT 355998 Query 143993 CTTGCATATAGAACTTAGGAGATGGGCTGATGTTTTTATTATAGCGCCCTTAACAGCAAA 144052 ||||||||||| || || | |||||| ||| |||| ||||| || || |||| ||||| Sbjct 355999 GTTGCATATAGAGCTAAGAAAATGGGCAGATATTTTAATTATTGCCCCTCTAACGGCAAA 356058 Query 144053 TACGTTAGCAAAAATAGCCAATGGTATATGCGATAATTTACTAACATCTATAGTAAGAGC 144112 ||| || ||||| || || | || |||||||| |||| | | || ||||| Sbjct 356059 TACTTTGAGTAAAATTGCATTAGGGTTGTGTGATAATTTGTTAACTAATGTTGTTAGAGC 356118 Query 144113 CTGGGATA 144120 ||| ||| Sbjct 356119 GTGGAATA 356126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981795977281398