Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2119 250 6e-61 seq2124 86.0 1e-11 >seq2119 Length=607893 Score = 250 bits (276), Expect = 6e-61 Identities = 583/869 (67%), Gaps = 19/869 (2%) Strand=Plus/Plus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 ||||||||||||||||||| | ||| | |||| | | | | ||||| |||| Sbjct 504552 ACTATTTTGGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGAATAAATGGTAAGATTG 504611 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 ||| | || ||||| | | | | ||||| ||||||||||||| |||||||| Sbjct 504612 CCGAAAGGCCCCAACATTTAATAATGAGAGTTGCCGTTGGTATTCATGGTGATGATATTG 504671 Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATT-----CATGCTAC 110476 | ||||||||||| |||| || | | || ||| || |||| |||||| | Sbjct 504672 ATTCTGTTATTGAAACTTATAATTTGAT--GTCAAAG---AGGTATTTCACACATGCTTC 504726 Query 110477 TCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAG 110535 ||| || || || || | || ||| || ||| || |||| || |||||| | | Sbjct 504727 TCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTCTTCATG-TTTCTTAGTTG 504785 Query 110536 GAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTT 110595 ||| || || ||||| ||||||||||| |||||| || | |||||| |||| | |||| Sbjct 504786 CAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAATGTGCTTTGATTT 504845 Query 110596 CTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATA 110655 | |||| |||| || ||||| | || | ||| ||||| | |||| || | ||| Sbjct 504846 CCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATCAACTGGTTCTTATA 504905 Query 110656 TCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACA 110715 | || | || ||| | || | ||| || |||||||| | || ||||| || ||| Sbjct 504906 TTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGATTAGGGTCTTTAATAACA 504965 Query 110716 CTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCG 110772 |||||| ||||| | |||||||| ||| ||| ||| | ||||| | ||| | | Sbjct 504966 CTGCAAGGTATGTTGACCAAGGTGGTAATAAAAGACCTGGTGCGTTTGCACTATATATTG 505025 Query 110773 AACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAG 110832 | ||||||||||||||||| |||| || | || | | ||||| || || |||| Sbjct 505026 AGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAACCACGGTAAAGAAG 505085 Query 110833 AACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTG 110892 || |||||| | |||||||| ||| | |||||| | |||||||| ||| || | | Sbjct 505086 AAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTGATTTATTTATGGAAAGAG 505145 Query 110893 TTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATG 110952 || | |||||| ||| || | | | ||| | | |||||| | ||||| Sbjct 505146 TTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAGCACCTGGTTTGAGTGATG 505205 Query 110953 TATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCA-AGTTTCGC 111011 ||||||| | || || |||| | || |||||||||| |||||| | || | Sbjct 505206 TATATGGTGATGAATTCAAAGAATTATATACCAAATATGAAAGAGAAGGTAGAGGCAGGA 505265 Query 111012 AAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGA 111071 ||| |||| ||| ||| | | |||| ||| | ||| | ||| ||||||||| Sbjct 505266 GAAC-AATTAAAGCACAAAAGTTATGGTATTCGATCTTAGAAGCTCAAACTGAAACTGGT 505324 Query 111072 ACTCCTTATATTTTGTATAAAGAT-CATATTAATCGCAAATCTAATCAAATGAATTTAGG 111130 || |||| || || ||||| ||| ||| ||| |||||||||||| ||||| || Sbjct 505325 ACACCTTTCATGTTATATAAGGATGCAT-GTAACAAGAAATCTAATCAACAAAATTTGGG 505383 Query 111131 AACAATTAAGTCTAGTAATTTGTGCTGTG 111159 || || ||| ||||| ||||||| Sbjct 505384 TGTTATCAAATCTTCCAATTTATGCTGTG 505412 >seq2124 Length=288178 Score = 86.0 bits (94), Expect = 1e-11 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 304889 CAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCT-CA 304947 ||||||||| |||| || | ||||||||||| |||||||| |||||| ||| || Sbjct 44478 CAATATCATGTTGCTACTTATATGGATAATGATATTGCTGGTCAGCCGCAGGC-TCTACA 44536 Query 304948 AAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTAT 305007 | ||| || ||||| | || |||||| || |||| ||||||||||||||| | Sbjct 44537 GAAATCAGGTAGACCGATCAAATCTATTAGAGCTCGTCTTAAGGGTAAAGAGGGTCGTTT 44596 Query 305008 TCGAGGTAATCTAATGGGAAAACGTGTTGATTTT 305041 ||||||| | ||||| || | ||||||||| Sbjct 44597 GAGAGGTAACTTGATGGGTAAGAGAGTTGATTTT 44630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186775058611202