Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq2142 141 2e-28
seq2206 114 3e-20
>seq2142
Length=155211
Score = 141 bits (156), Expect = 2e-28
Identities = 157/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || | || || || || || || || ||||| ||| ||||||||| |
Sbjct 147549 TTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGACACCAT 147608
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
||| || ||||||||||| ||||| || ||||| ||| || ||| ||||||||
Sbjct 147609 CGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACCAACAAAGACT 147668
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
|||||| || || ||||| || |||||||| || ||||| |||| |||||| |||| ||
Sbjct 147669 TATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAACATCCAAAA 147728
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| ||||| |||||| | || ||||||
Sbjct 147729 GGAATCTACCCTTCACTTGGTCTTGAGA 147756
>seq2206
Length=14499
Score = 114 bits (126), Expect = 3e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || || || || || || || ||||| || |||||||| ||||
Sbjct 8969 AAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCTGACACTATCGACAAT 9028
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || || ||||| || ||||| ||| || ||| ||||||||||||||
Sbjct 9029 GTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGACTTATCTTT 9088
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| || |||||||| || |||||| | || |||||| | || || || |||
Sbjct 9089 GCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAGGAATCT 9148
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
||||||||| | || ||||||
Sbjct 9149 ACTCTTCACTTAGTCTTGAGA 9169
Score = 114 bits (126), Expect = 3e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || || || || || || || ||||| || |||||||| ||||
Sbjct 11931 AAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCTGACACTATCGACAAT 11990
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || || ||||| || ||||| ||| || ||| ||||||||||||||
Sbjct 11991 GTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGACTTATCTTT 12050
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| || |||||||| || |||||| | || |||||| | || || || |||
Sbjct 12051 GCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAGGAATCT 12110
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
||||||||| | || ||||||
Sbjct 12111 ACTCTTCACTTAGTCTTGAGA 12131
Score = 84.2 bits (92), Expect = 5e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816
|||||| || | |||||||||||| || || || | || ||||||| |||||| || ||
Sbjct 9169 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 9110
Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||| | ||||| || || |||||||| | ||||||
Sbjct 9109 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTG 9071
Score = 84.2 bits (92), Expect = 5e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816
|||||| || | |||||||||||| || || || | || ||||||| |||||| || ||
Sbjct 12131 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 12072
Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||| | ||||| || || |||||||| | ||||||
Sbjct 12071 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTG 12033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181783217359922
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |