Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2119 268 7e-67
seq2180 132 4e-26
>seq2119
Length=607893
Score = 268 bits (296), Expect = 7e-67
Identities = 425/601 (71%), Gaps = 20/601 (3%)
Strand=Plus/Plus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|||||||| | |||||||| | ||||| || || |||||||||||||| || ||| |
Sbjct 160222 AGGTTTGTTCTCTTTCCAATCAAGTATCACGAAATTTGGCAAATGTACAAGAAGGCAGAA 160281
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGAT--- 43812
|| || || ||||| || || ||| ||||| | | ||||| || ||| ||||||
Sbjct 160282 GCATCTTTCTGGACTGCGGAGGAAATTGATCTCTCCAAAGATTT-GCATGATTGGAACAA 160340
Query 43813 TGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872
| ||| || | | |||| | || || || ||| | ||||| ||||||||
Sbjct 160341 TAGATTGAACGAAAATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTC 160400
Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAG--AAGTTCAATTACCA 43930
|| || ||||||||||||||||| ||| | || | |||| | |||||| | |||
Sbjct 160401 TGATGGTATAGTCAATGAAAATTTAGTTGA--GAATTTCTCAAGTGATGTTCAAATTCCA 160458
Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990
|| || |||||| |||||||| |||||| || ||||| ||||||||||||| ||
Sbjct 160459 GAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAAACATTCATTCGGAAACTTAT 160518
Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAA 44046
| | |||| ||||| |||||||||||| || | | ||| || || || ||
Sbjct 160519 TCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAAAGTGAAT--TC--TTATTCAA 160574
Query 44047 TGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT--- 44103
||| || |||||| | || || || | || || || |||||| | ||||||||
Sbjct 160575 TGCAATTGAAACAATCCCATGTATCAAGGAAAAGGCCGAATGGGCCTTAAAATGGATTGC 160634
Query 44104 AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTT 44163
| || | ||| | |||| ||| | | || || ||||| | ||| ||||| |||||
Sbjct 160635 AGATAAAGATGCGTTGTTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTT 160694
Query 44164 CTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTT 44223
||| || || || ||||| |||| || ||||| || || ||||||||||||| || ||
Sbjct 160695 CTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTT 160754
Query 44224 GACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283
|||||| || || ||| | || || | |||||||| |||||| |||||||||||| ||
Sbjct 160755 GACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTT 160814
Query 44284 G 44284
|
Sbjct 160815 G 160815
>seq2180
Length=45989
Score = 132 bits (146), Expect = 4e-26
Identities = 380/580 (66%), Gaps = 26/580 (4%)
Strand=Plus/Plus
Query 19242 AATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGT 19301
||||||||| || |||||| || ||| || || | |||||||||| || | |
Sbjct 21623 AATTGGAGGTTTAGATAAAGAATTCACTGCTATTTTCAGAAGAGCATTTGCATCAAGAAT 21682
Query 19302 TTTTTCTGCAGATGTCATTAAACAATTGGG-ATGTAAACATGTTCGTGGACTTTTGCTTT 19360
||| | ||| ||| ||| | || |||| ||| | || | || | || || |
Sbjct 21683 CTTTCCACCAGGTGTTATTGAGAAAATGGGCATG-ACGCACATCAAAGGTATGTTACTCT 21741
Query 19361 ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA--- 19417
| || || || ||| ||| ||||| || ||||| ||| || | |||| | ||||
Sbjct 21742 ACGGTCCCCCTGGTACTGGTAAAACCTTGATTGCTAGACAAATCGGTAAGATGCTTAATG 21801
Query 19418 CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAAT 19477
|||| |||| |||||||| || || |||||||| || || ||||| ||| ||
Sbjct 21802 CAAAGGAACCA---AAAATTGTCAACGGACCTGAAATTTTGTCCAAGTATGTCGGTTCAT 21858
Query 19478 CGGAAGAAAATGTACGACGTTTGTT------TGCTGACGCTGAAGAAGAACAAAAACGTT 19531
| ||||| || | || |||||| ||| || | |||| | || ||||| | |
Sbjct 21859 CTGAAGAGAACATTCGTAATTTGTTCAAGGATGCAGAGGATGAATAC-AAGAAAAAGGGT 21917
Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591
| | | | | || | || ||||| || | ||||||||||| | | | || |
Sbjct 21918 GATGCCTC-----TGCTCTACATATTATCATCTTTGATGAATTGGATTCCGTTTTCAAAC 21972
Query 19592 AAAGAGGTTCTGG------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645
|||||||||| | || || ||| || || | |||||||||||| | ||
Sbjct 21973 AAAGAGGTTCAAGAGGCGATGGAACTGGTGTTGCGGATAATGTTGTCAATCAGTTGTTGG 22032
Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705
| || | || ||||| | ||| | |||||||| || || ||||| ||||||||||||
Sbjct 22033 CTAAGATGGATGGTGTCGATCAATTAAATAATATATTGGTCATTGGTATGACTAATAGAA 22092
Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765
|| ||||| ||||| ||| || | |||| ||| | || || | | | ||||||
Sbjct 22093 GAGATTTAATTGACAGTGCCCTACTGAGACCTGGTAGATTTGAGGTTCAAGTTGAAATTC 22152
Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACAT 19805
| ||||| |||||| || | || ||||||| || ||
Sbjct 22153 ATTTACCTGATGAAGAAGGTAGATTGCAAATTTTGAAAAT 22192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397443977204410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |