Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2119 268 7e-67 seq2180 132 4e-26 >seq2119 Length=607893 Score = 268 bits (296), Expect = 7e-67 Identities = 425/601 (71%), Gaps = 20/601 (3%) Strand=Plus/Plus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 |||||||| | |||||||| | ||||| || || |||||||||||||| || ||| | Sbjct 160222 AGGTTTGTTCTCTTTCCAATCAAGTATCACGAAATTTGGCAAATGTACAAGAAGGCAGAA 160281 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGAT--- 43812 || || || ||||| || || ||| ||||| | | ||||| || ||| |||||| Sbjct 160282 GCATCTTTCTGGACTGCGGAGGAAATTGATCTCTCCAAAGATTT-GCATGATTGGAACAA 160340 Query 43813 TGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872 | ||| || | | |||| | || || || ||| | ||||| |||||||| Sbjct 160341 TAGATTGAACGAAAATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTC 160400 Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAG--AAGTTCAATTACCA 43930 || || ||||||||||||||||| ||| | || | |||| | |||||| | ||| Sbjct 160401 TGATGGTATAGTCAATGAAAATTTAGTTGA--GAATTTCTCAAGTGATGTTCAAATTCCA 160458 Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990 || || |||||| |||||||| |||||| || ||||| ||||||||||||| || Sbjct 160459 GAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAAACATTCATTCGGAAACTTAT 160518 Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAA 44046 | | |||| ||||| |||||||||||| || | | ||| || || || || Sbjct 160519 TCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAAAGTGAAT--TC--TTATTCAA 160574 Query 44047 TGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT--- 44103 ||| || |||||| | || || || | || || || |||||| | |||||||| Sbjct 160575 TGCAATTGAAACAATCCCATGTATCAAGGAAAAGGCCGAATGGGCCTTAAAATGGATTGC 160634 Query 44104 AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTT 44163 | || | ||| | |||| ||| | | || || ||||| | ||| ||||| ||||| Sbjct 160635 AGATAAAGATGCGTTGTTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTT 160694 Query 44164 CTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTT 44223 ||| || || || ||||| |||| || ||||| || || ||||||||||||| || || Sbjct 160695 CTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTT 160754 Query 44224 GACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283 |||||| || || ||| | || || | |||||||| |||||| |||||||||||| || Sbjct 160755 GACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTT 160814 Query 44284 G 44284 | Sbjct 160815 G 160815 >seq2180 Length=45989 Score = 132 bits (146), Expect = 4e-26 Identities = 380/580 (66%), Gaps = 26/580 (4%) Strand=Plus/Plus Query 19242 AATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGT 19301 ||||||||| || |||||| || ||| || || | |||||||||| || | | Sbjct 21623 AATTGGAGGTTTAGATAAAGAATTCACTGCTATTTTCAGAAGAGCATTTGCATCAAGAAT 21682 Query 19302 TTTTTCTGCAGATGTCATTAAACAATTGGG-ATGTAAACATGTTCGTGGACTTTTGCTTT 19360 ||| | ||| ||| ||| | || |||| ||| | || | || | || || | Sbjct 21683 CTTTCCACCAGGTGTTATTGAGAAAATGGGCATG-ACGCACATCAAAGGTATGTTACTCT 21741 Query 19361 ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA--- 19417 | || || || ||| ||| ||||| || ||||| ||| || | |||| | |||| Sbjct 21742 ACGGTCCCCCTGGTACTGGTAAAACCTTGATTGCTAGACAAATCGGTAAGATGCTTAATG 21801 Query 19418 CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAAT 19477 |||| |||| |||||||| || || |||||||| || || ||||| ||| || Sbjct 21802 CAAAGGAACCA---AAAATTGTCAACGGACCTGAAATTTTGTCCAAGTATGTCGGTTCAT 21858 Query 19478 CGGAAGAAAATGTACGACGTTTGTT------TGCTGACGCTGAAGAAGAACAAAAACGTT 19531 | ||||| || | || |||||| ||| || | |||| | || ||||| | | Sbjct 21859 CTGAAGAGAACATTCGTAATTTGTTCAAGGATGCAGAGGATGAATAC-AAGAAAAAGGGT 21917 Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591 | | | | | || | || ||||| || | ||||||||||| | | | || | Sbjct 21918 GATGCCTC-----TGCTCTACATATTATCATCTTTGATGAATTGGATTCCGTTTTCAAAC 21972 Query 19592 AAAGAGGTTCTGG------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645 |||||||||| | || || ||| || || | |||||||||||| | || Sbjct 21973 AAAGAGGTTCAAGAGGCGATGGAACTGGTGTTGCGGATAATGTTGTCAATCAGTTGTTGG 22032 Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705 | || | || ||||| | ||| | |||||||| || || ||||| |||||||||||| Sbjct 22033 CTAAGATGGATGGTGTCGATCAATTAAATAATATATTGGTCATTGGTATGACTAATAGAA 22092 Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765 || ||||| ||||| ||| || | |||| ||| | || || | | | |||||| Sbjct 22093 GAGATTTAATTGACAGTGCCCTACTGAGACCTGGTAGATTTGAGGTTCAAGTTGAAATTC 22152 Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACAT 19805 | ||||| |||||| || | || ||||||| || || Sbjct 22153 ATTTACCTGATGAAGAAGGTAGATTGCAAATTTTGAAAAT 22192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397443977204410