Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2119 214 2e-50 >seq2119 Length=607893 Score = 214 bits (236), Expect = 2e-50 Identities = 688/1051 (65%), Gaps = 34/1051 (3%) Strand=Plus/Minus Query 117840 AGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAAC 117899 ||||| ||||| || ||||||||||||| |||||| |||| | |||||| || | || Sbjct 506346 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 506287 Query 117900 TTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 117959 || | |||||| ||| || || ||||||| ||| || ||||| | | | Sbjct 506286 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 506227 Query 117960 CCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAG 118019 || | ||| || |||||||| || | ||| | ||| ||||| |||||| | || Sbjct 506226 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 506167 Query 118020 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACC 118079 | || ||| || || | || |||| | | || || || || ||| | || Sbjct 506166 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 506107 Query 118080 ATGAGATCCTTCATA---TCCTTTGACCAGAGACCAATCTTTTTGAGATC-CTCCACGAG 118135 || | | |||||| || || |||||| || || | | ||| ||| || | Sbjct 506106 ATATGGTTTTTCATAGAATCATT---CCAGAGTCCCATTTCAACTAAATCTCTCAAC-AT 506051 Query 118136 ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCG 118194 || ||||||| || ||||| || | | ||| ||| || ||||||| | Sbjct 506050 ATAAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCT-AGAGTAAATATTGGAAG 505992 Query 118195 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 118254 |||| || |||||||| || |||| ||| | ||||| | ||| || || || ||||| | Sbjct 505991 TGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTG 505932 Query 118255 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCC 118314 |||| | || | || | | ||| || || | || ||||| | | |||| Sbjct 505931 GTGCAACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 505872 Query 118315 AGTCGTAGTTGAGCT--TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 118372 |||| || | || | ||| || | ||| | ||||||||| |||| ||||||||| Sbjct 505871 AGTCATA--TAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGA 505814 Query 118373 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC--GCCAATTCGGAGCTC 118430 || || ||||| ||||| ||||||||||| || || ||| | ||||| || Sbjct 505813 TGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTAATAGATAATTCAACACTT 505756 Query 118431 GCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 118490 ||||| | || || ||||| || ||||||||||| || ||||| | |||| || || Sbjct 505755 GCCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCT 505696 Query 118491 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 118550 |||||||| | | || ||| || || |||| || | |||||||||||| | Sbjct 505695 GGCGAATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACA 505636 Query 118551 CCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTA 118610 ||||||| | | ||||||||| || ||| || || || || ||||| | || ||| Sbjct 505635 GCAATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTA 505576 Query 118611 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC---G 118667 ||||| | |||| | ||||| || ||||||||||| |||||||| | ||| || | Sbjct 505575 TCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAG 505516 Query 118668 TAAT--CAAAACTGCGAGTC-TC---TTCATTGACATACTTAGGAAGGGCGATTGACGCC 118721 | || ||| | | | ||| || |||| ||| | ||| | || | || Sbjct 505515 TTATACCAACAGTTCTTGTCATCACTTTCA---ACAAATGCAGGCAATGCAACACTAGCT 505459 Query 118722 AGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTCTATAATTTCCGTGCACAAGT 118779 | |||||| || | || || || | || | || || | |||||| ||| || | Sbjct 505458 AAATTACAAACTGCTGTTTCCTCAGGTGAT--GAATATTCAACAATTTCACAGCATAAAT 505401 Query 118780 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 118839 | ||| || || ||||| || | |||||| || || ||||||| |||||||| | Sbjct 505400 TGGAAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTAT 505341 Query 118840 AAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 | | |||| | || || || || || ||||| Sbjct 505340 ATAACATGAAAGGTGTACCAGTTTCAGTTTG 505310 Score = 109 bits (120), Expect = 7e-19 Identities = 327/493 (66%), Gaps = 19/493 (4%) Strand=Plus/Minus Query 130049 ATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 130108 || || || || ||||| || ||||||||| | ||| | ||| ||||||||||| || Sbjct 160775 ATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATG 160716 Query 130109 GCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCA 130168 | |||||| ||||||||||| || || || ||| || || || | | | ||| Sbjct 160715 GATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCT 160656 Query 130169 GCAAAGGAGCGGGACTTTGTAT-CAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGAT 130227 ||||| | || |||| | | ||| ||| || | ||||| | ||||||| || ||| Sbjct 160655 GCAAA-CAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGGCCTTTTCCTTGAT 160597 Query 130228 ACACGGGACGGTCTGGATCGC-TTCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGAT 130284 ||| |||| || | || || || | |||| ||| |||| || |||||||||||| Sbjct 160596 ACATGGGATTGTTTCAATTGCATTGAATAAGAATTC--ACTTTCCT-TTGGATCTTTGAT 160540 Query 130285 GTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCATTT-CATTATGGCACTGAT 130343 ||| |||| || | | ||||| ||||| ||| | ||| ||| || || Sbjct 160539 GTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCAT-AATTTGGA 160481 Query 130344 ACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGCAAAATTGTTATTGATAT 130403 || | |||||| | || || || || || ||| || ||||| | | | || Sbjct 160480 ACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTCTCAACTAAAT 160421 Query 130404 TCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA---TATACTTTATGAATT 130460 | ||| || || ||||| || ||||||| ||||| || | | | | | |||| Sbjct 160420 TTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATC 160361 Query 130461 TCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCT 130517 | |||||| ||||||| | ||||| || | | ||| || |||||||| | | Sbjct 160360 T---TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTT 160304 Query 130518 CCTCCGCAGTCCA 130530 ||||||||||||| Sbjct 160303 CCTCCGCAGTCCA 160291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618416013047920