Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2119 309 4e-79 >seq2119 Length=607893 Score = 309 bits (342), Expect = 4e-79 Identities = 1176/1825 (64%), Gaps = 37/1825 (2%) Strand=Plus/Plus Query 104138 AGAGACTACGACTTTGGTTATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGG 104197 ||||||| | | | | ||||||||| ||||||| | || | ||| |||||| | | Sbjct 504536 AGAGACTTCAATTATAACTATTTTGGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGA 504595 Query 104198 CTCGATGGTGTCTTGATGGAAACCCCACAGTACATGT--TCATGCGCGTGGCCATCGGTA 104255 | ||||| | |||| || || |||| | | ||| | || ||| | |||| Sbjct 504596 ATAAATGGTAAGATTGCCGAAAGGCCCCA--ACATTTAATAATGAGAGTTGCCGTTGGTA 504653 Query 104256 TTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATG 104314 ||||||| || || ||||||||||| | || || || | |||||| | |||||| Sbjct 504654 TTCATGGTGATGATATTGATTCTGTTATTGAAACTTATAATTTGATGTCAAAGAGGTAT- 504712 Query 104315 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGT 104374 |||| || || | ||||| || |||||| | ||||| |||||| |||||||| Sbjct 504713 TTCACACATGCTTCTCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTCTTCA 504772 Query 104375 TGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAG 104434 || ||| | | || | ||||| || || || | |||||||||| ||| | | || Sbjct 504773 TGTTTCTTAGTTGCAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAA 504832 Query 104435 TGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCC 104494 ||||| || || || ||||| ||||||||| | || || ||| || | ||| | Sbjct 504833 TGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATCA 504892 Query 104495 AATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 104554 | | ||| |||| || || |||||| ||| |||| |||||||||||| || | Sbjct 504893 ACTGGTTCTTATATTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGATTAGG 504952 Query 104555 GTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTAT 104610 || ||||| ||| || | ||||| | |||| ||| | |||| || | | Sbjct 504953 GTCTTTAATAACACTGCAAGGTATGTTGACCAAGGTGGTAATA-AAAGACCTGGTGCGTT 505011 Query 104611 CGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAA 104670 ||| | ||| ||||||| ||||| | ||||| | || || |||| | | || Sbjct 505012 TGCACTATATATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAA 505071 Query 104671 CCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCT 104730 ||| ||| | || || | | ||| | ||| | ||| | |||||||| ||| | Sbjct 505072 CCACGGTAAAGAAGAAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTGATTT 505131 Query 104731 CTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCAC 104789 || ||| | ||||||||| | | || ||||| || |||| | || || ||| ||| Sbjct 505132 ATTTATGGAAAGAGTTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAG-CAC 505190 Query 104790 CTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAG 104849 ||||| | |||| ||||| || || ||| | || || || || || || Sbjct 505191 CTGGTTTGAGTGATGTATATGGTGATGAATTCAAAGAATTATATACCAAATATGAAAGAG 505250 Query 104850 AAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTC 104909 ||||| | | | || | ||| | | ||| | | || | | ||| Sbjct 505251 AAGGTAGAGGCAGGAGAACAATTAAAGCACAAAAGTTATGGTATTCGATCTTAGAAGCTC 505310 Query 104910 AAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATC 104969 |||| || ||||||||||| | |||| | || || || || |||||| | || ||||| Sbjct 505311 AAACTGAAACTGGTACACCTTTCATGTTATATAAGGATGCATGTAACAAGAAATCTAATC 505370 Query 104970 AAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG 105029 || | ||||||||||| ||||| ||||||| | || ||||| | |||| | || Sbjct 505371 AACAAAATTTGGGTGTTATCAAATCTTCCAATTTATGCTGTGAAATTGTTGAATATTCAT 505430 Query 105030 ACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATC 105089 || || || || || ||||| | || | || | || | ||| || Sbjct 505431 CACCTGAGGAAACAGCAGTTTGTAATTTAGCTAGTGTTGCATTGCCTGCATTTGTTGAAA 505490 Query 105090 CAGA-GACAAAGACATTTGAT-----TATGAAAAACTCCACGAAGTTACGAAAACTGTCA 105143 || ||||| || ||| | | ||| || | || ||| |||| || ||| | Sbjct 505491 GTGATGACAAGAACTGTTGGTATAACTTTGAGAAGTTACATGAAATTACAAAGGTTGTGA 505550 Query 105144 CCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAAT 105203 | |||||| | || | | | || |||||||| | || || ||||| ||||| | | || Sbjct 505551 CTAAAAACTTGAATAAAATCATCGATAGAAACTACTATCCTGTTGAAACTGCAAGGAGAT 505610 Query 105204 CTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTC 105263 | ||||||||| || | ||||||| | | ||||| || ||| | || |||| ||||| Sbjct 505611 CAAATATGAGAAACAGACCAATTGCTGTTGGTGTCCAAGGTTTGGCAGATGCCTTCATGA 505670 Query 105264 T-TTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAG 105322 | ||| || |||||||||| ||||| |||||| | ||| | || ||||| Sbjct 505671 TGTTGAGATTAC-CATTTGATTCGCCAGAAGCAAAGGAACTGAATATTCAAATTTTTGAA 505729 Query 105323 ACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAG--AGGTTGATGGTCCAT 105380 ||||| ||||| || ||| | ||||| ||| || || | ||| ||||| |||| Sbjct 505730 ACCATTTATCATGCTGCTTTGGAGGCAAGTGTTGAATTATCTATTAGG--GATGGACCAT 505787 Query 105381 ATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG--A 105438 |||| || ||||| || ||||| || || ||||| | || || |||||| | |||| | Sbjct 505788 ATGAGACTTTTGAAGGATCTCCTGCATCCCAAGGTCTCCTACAGTTTGATCTTTGGGGTA 505847 Query 105439 AGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGG 105498 || | | | | ||| || |||||||| | | ||||| ||||||| || || Sbjct 505848 AGAAGCCAACCAACTTA--TATGACTGGGATTCATTAAAGGAGAAAATCAAGGCCAATGG 505905 Query 105499 TCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGG 105558 | | | || | || | || |||||||| || || || || | ||||| | || Sbjct 505906 TTTGAGAAATTCATTGCTTGTTGCACCAATGCCGACTGCTTCAACATCTCAAATTCTAGG 505965 Query 105559 TAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGG 105617 | | || |||||||||||||| ||||| | || || || ||| |||||| | || | Sbjct 505966 TTACAACGAATGCTTTGAACCTTACACTTCCAATATTTACTCT-AGAAGAGTTTTAGCCG 506024 Query 105618 GAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGT 105677 | || || |||||||||| || | || || | || || || |||||| Sbjct 506025 GTGAATTCCAGATTGTCAACCCTTATATGTTGAGAGATTTAGTTGAAATGGGACTCTGG- 506083 Query 105678 CCAAGGA---TATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGG 105734 || || |||||| | | || | || |||||| ||||| || | | Sbjct 506084 --AATGATTCTATGAAAAACCATATCATCTCAGATAATGGTTCGATTCAGAACTTACCGA 506141 Query 105735 ATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATG 105794 ||||||| | || || ||| | || || || || ||||| ||| | ||| Sbjct 506142 ATATTCCTCAAGAGATCAAGGACTTATATAAGACTGTCTGGGAGATCTCGCAAAAGACAA 506201 Query 105795 TCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCT 105854 | || || ||||| || ||| | ||| | | | ||||| ||| |||||| || Sbjct 506202 TTATCGATATGGCTGCTGATAGAGGTGCATACGTGGATCAGTCACAATCTATGAACATCC 506261 Query 105855 TCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGG 105914 || ||| |||||| ||| || | | || ||||| | || |||||||||||| Sbjct 506262 ATTTGAAAAATCCAACAATGGGTAAATTAACGTCCATGCATTTCTATGGTTGGAAGAAGG 506321 Query 105915 GTCTCAAAACGGGGATGTATTACCT 105939 | ||||| || || ||||||||||| Sbjct 506322 GGCTCAAGACAGGTATGTATTACCT 506346 Score = 95.1 bits (104), Expect = 1e-14 Identities = 339/515 (66%), Gaps = 20/515 (4%) Strand=Plus/Plus Query 94730 AAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTG-ATACAAAG 94788 ||||| | || ||||| | | || || || ||||| | || ||| ||| | | |||| Sbjct 160583 AAACAATCCCATGTATCAAGGAAAAGGCCGAATGGGCCTTAAAATGGATTGCAGATAAAG 160642 Query 94789 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 94848 ||||| ||||| ||| | | | |||||||| |||||| ||||| ||||||||| Sbjct 160643 ATGCGTTG-TTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCT 160701 Query 94849 GGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 94907 ||||| || ||| | || | ||| | || ||| ||||| | ||||||||| | || Sbjct 160702 GGTTCATT-TGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTT 160760 Query 94908 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACTT 94965 |||||||||||| || | | | || || || | || || ||||| | | | ||| Sbjct 160761 CTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCTT 160820 Query 94966 TTCAAATTATTGCGTATTAAACCA-ACGACTGAGACTATTCATTC-TATTGTTAAGGAAG 95023 |||| || ||| || ||| |||| | | | ||| | || ||| |||| Sbjct 160821 TTCACAT--TTGAACCATACCCCAGACGA--AAAAATTGTCAGACAAATCATTACCGAAG 160876 Query 95024 CCGTTGAGATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGA 95083 ||||||| ||||| || || | | || ||||| || | | ||||||||| Sbjct 160877 CCGTTGATATTGAAAAGAAATACTTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGA 160936 Query 95084 ATTCTGAAAAAATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTGA-AGCAGATC 95142 || || |||| | | ||| | |||| ||| | |||||| | ||| || || Sbjct 160937 ATAAGGATTTGATGTGTCAGTATGTCGAGTTTGTTGCAGATAGACTACTGATTGC--ATT 160994 Query 95143 GGGGTGCCTCCAA---TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGC 95199 || || | || | | || | |||||||| ||||| |||||||||||| | Sbjct 160995 AGGATG--TGAAAAGGTATACGACGTTACAAATCCATTCGACTTTATGGAGAACATTTCC 161052 Query 95200 CTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGT 95234 || | || || |||||||| ||||||||||| || Sbjct 161053 CTTGCTGGTAAAACAAACTTTTTCGAAAAGAGAGT 161087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583242704333680