Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq2121 84.2 1e-11 >seq2121 Length=385940 Score = 84.2 bits (92), Expect = 1e-11 Identities = 196/288 (68%), Gaps = 6/288 (2%) Strand=Plus/Plus Query 65093 CCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCC 65152 ||||| ||||| ||| | |||||||||||||| || ||||||| ||||| ||| || Sbjct 263714 CCAAAACCACCATGTGGAACCAATAAATTAATATTATTAGAACCAACAAAATCCTGTGCT 263773 Query 65153 ATTCCGATAATTG-CTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTTCAGA 65211 | || ||||| | |||| ||| || ||||||||||| ||||| | |||||| | Sbjct 263774 AAACCAATAATCGATTGCA-TTAGGGATGCATCACCGTGATGGTATCCAGTATGTTCGGC 263832 Query 65212 GACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAATGCA-G 65270 | || || ||||| | ||||| ||||| | || || |||| | ||| | Sbjct 263833 AATGTAACCTTCTAATTGCGAGACTTTAATTTCGTCCCTCAAGTTACGTTTATA-GCATG 263891 Query 65271 AATACAATAT-TTTCCGTAAACTAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTG 65329 ||| | || |||| | |||| || || |||||||| | | || |||| |||| Sbjct 263892 CATAGAGAATCTTTCTTTGAACT-GGCTTGAACCCATCCATAACAGAAGCAATGGATCTG 263950 Query 65330 TCACAATCATATTTTGAGAAATGTATGAATTCTTTGTTAATAAATTCT 65377 | |||| | ||||| | || |||||||| ||||| |||||| Sbjct 263951 ACGTTATCAGCCATAGAGAAGAGGATTAATTCTTTATTAATGAATTCT 263998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235672870827300