Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07]
2,482 sequences; 12,940,563 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq2206 136 5e-27
seq2142 127 2e-24
seq2119 96.9 4e-15
>seq2206
Length=14499
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || || | || || ||||||||||| | || || |||||| |
Sbjct 8954 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 9013
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| ||||||| || |||||||| || ||||| || |||||
Sbjct 9014 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 9073
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || ||||| ||||||||| | || |||| | | || | | ||||| ||
Sbjct 9074 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 9133
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| ||||||||||| |||||||| ||||||||
Sbjct 9134 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTG 9166
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || || | || || ||||||||||| | || || |||||| |
Sbjct 11916 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 11975
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| ||||||| || |||||||| || ||||| || |||||
Sbjct 11976 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 12035
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || ||||| ||||||||| | || |||| | | || | | ||||| ||
Sbjct 12036 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 12095
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| ||||||||||| |||||||| ||||||||
Sbjct 12096 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTG 12128
>seq2142
Length=155211
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||||||||| | ||||| ||||| ||||| | || ||||| || |
Sbjct 147541 ATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 147600
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| || || || || ||||| || ||||| || |||||
Sbjct 147601 GACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACCAA 147660
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || ||||| ||||||||| | || |||| | | || || | ||||| ||
Sbjct 147661 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAAC 147720
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||| || ||||| | ||||||
Sbjct 147721 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTG 147753
>seq2119
Length=607893
Score = 96.9 bits (106), Expect = 4e-15
Identities = 284/426 (67%), Gaps = 14/426 (3%)
Strand=Plus/Plus
Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785
|| ||||| ||| ||||| |||||||| ||||| ||||| || || |||||| |
Sbjct 160669 GCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGTTG 160728
Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845
|||||| | || ||||||||||| || |||| || ||||||||||| | | | || ||
Sbjct 160729 AAAAAGAGAGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGATGAA 160788
Query 64846 GGGCTCCACCAAGAATTTGC--GGTTACCCTGTTCAGCCACCTCAAGGACAAACCATCAC 64903
|| | || || ||||| | || | || |||| || | || || ||| ||
Sbjct 160789 GGTTTACATACCGATTTTGCTTGTTTGCTCTTTTCA--CATTTGAA--CCATACC-CCAG 160843
Query 64904 ATGGGACTATAAT-TGATATAGTAAAATCG--GCTGTAGAAATTGAAAAGGAATTCATTA 64960
| | | || | || | | | | || || || || ||||||||| ||| | | |
Sbjct 160844 ACGAAAAAATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAAAAGAAATACTTCA 160903
Query 64961 CTGCCGCGCTTCCGTGTCGTC-TCATCGGCATGGATGCCGATAAGATGAAACAGTATATC 65019
||| ||| || || |||| | | |||| ||| || ||| |||| |||||| ||
Sbjct 160904 CTGACGCCCTACC-TGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTATGTC 160962
Query 65020 GAATTTGTAGCAGATCGCCTGCTTACT-CAGTTTGGTATTAAGCCCTACTGGAATTCTTC 65078
|| ||||| |||||| | || || | | || | | | | || || || | | |
Sbjct 160963 GAGTTTGTTGCAGATAGACTACTGATTGCATTAGGATGTGAAAAGGTATACGACGT-TAC 161021
Query 65079 AAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTTGAAAA 65138
||||||||| |||| ||||||| || ||| | || || || |||||||| |||||
Sbjct 161022 AAATCCATTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAAACAAACTTTTTCGAAAA 161081
Query 65139 GAGGGT 65144
||| ||
Sbjct 161082 GAGAGT 161087
Score = 82.4 bits (90), Expect = 9e-11
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 80044 AGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGC 80103
|| || ||||| || |||||||| ||||||||||| || || | ||||| || | |
Sbjct 506346 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 506287
Query 80104 TTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCC 80163
|| | | ||| || || | || |||||||| ||| || |||||| | | | ||
Sbjct 506286 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 506227
Query 80164 CCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGT 80216
|| | ||| || ||||| || ||||||| |||||| | || ||||| || ||
Sbjct 506226 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGT 506174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570292706119840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |